RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	MOV10L1	Q9BXT6	1211 aa	Known RBP	12.06	□□□□□ -0.48
TP53-223	ENST00000618944	EXOC7	Q9UPT5	735 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	FAM169A	Q9Y6X4	670 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	ZNF862	O60290	1169 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	CLSTN1	O94985	981 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.06	□□□□□ -0.48
TP53-223	ENST00000618944	SLC39A4	Q6P5W5	647 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	JAML	Q86YT9	394 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	PRELID2	Q8N945	189 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	HELQ	Q8TDG4	1101 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	SEC14L1	Q92503	715 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	ZSWIM1	Q9BR11	485 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	RAB17	Q9H0T7	212 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	ST6GALNAC4	Q9H4F1	302 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	RNF146	Q9NTX7	359 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	PTPN22	Q9Y2R2	807 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	PCDHA10	Q9Y5I2	948 aa		12.06	□□□□□ -0.48
TP53-223	ENST00000618944	MYH11	P35749	1972 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	CTNND1	O60716	968 aa	Known RBP	12.05	□□□□□ -0.48
TP53-223	ENST00000618944	NR3C2	P08235	984 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	KRT5	P13647	590 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	CYP11B1	P15538	503 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	PEX5	P50542	639 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	KRT76	Q01546	638 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	IFFO1	Q0D2I5	559 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	LMBRD2	Q68DH5	695 aa	Predicted RBP	12.05	□□□□□ -0.48
TP53-223	ENST00000618944	DUPD1	Q68J44	220 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	TTC27	Q6P3X3	843 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	JDP2	Q8WYK2	163 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	FAM213A	Q9BRX8	229 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	EPN3	Q9H201	632 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	ANKEF1	Q9NU02	776 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	RAB20	Q9NX57	234 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	TRPC6	Q9Y210	931 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944		E7EVH7	732 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	SPOP	O43791	374 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	SHBG	P04278	402 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	SFN	P31947	248 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	MAGEA9	P43362	315 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	KCNJ1	P48048	391 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	PTGIS	Q16647	500 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	KRT71	Q3SY84	523 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	C11orf63	Q6NUN7	778 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	SV2A	Q7L0J3	742 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	VSIG10L	Q86VR7	867 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	UHMK1	Q8TAS1	419 aa	Known RBP	12.05	□□□□□ -0.48
TP53-223	ENST00000618944	ZNF564	Q8TBZ8	553 aa	Predicted RBP	12.05	□□□□□ -0.48
TP53-223	ENST00000618944	FBXO25	Q8TCJ0	367 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	ZNF653	Q96CK0	615 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	BICD1	Q96G01	975 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	TSPYL1	Q9H0U9	437 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	TMEM8A	Q9HCN3	771 aa		12.05	□□□□□ -0.48
TP53-223	ENST00000618944	CNOT8	Q9UFF9	292 aa	Known RBP	12.05	□□□□□ -0.48
TP53-223	ENST00000618944	RBBP6	Q7Z6E9	1792 aa	Known RBP	12.04	□□□□□ -0.48
TP53-223	ENST00000618944	PFAS	O15067	1338 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	ADGRA3	Q8IWK6	1321 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944		A6NNZ2	444 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	MIF4GD	A9UHW6	222 aa	Known RBP	12.04	□□□□□ -0.48
TP53-223	ENST00000618944	PTGIR	P43119	386 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	LIG3	P49916	1009 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	MAGOH	P61326	146 aa	Known RBP	12.04	□□□□□ -0.48
TP53-223	ENST00000618944	GHRHR	Q02643	423 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	MTMR3	Q13615	1198 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	TUBB8	Q3ZCM7	444 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	C2CD6	Q53TS8	623 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	SNRNP48	Q6IEG0	339 aa	Known RBP	12.04	□□□□□ -0.48
TP53-223	ENST00000618944	RUFY4	Q6ZNE9	571 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	CYFIP1	Q7L576	1253 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	OTUD6A	Q7L8S5	288 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	MAP4K3	Q8IVH8	894 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	FBXL13	Q8NEE6	735 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	TMEM174	Q8WUU8	243 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	SHC3	Q92529	594 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	CCT8L2	Q96SF2	557 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	ZDHHC18	Q9NUE0	388 aa		12.04	□□□□□ -0.48
TP53-223	ENST00000618944	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.04	□□□□□ -0.48
TP53-223	ENST00000618944	TLDC2	A0PJX2	215 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	SMIM23	A6NLE4	172 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	HNRNPDL	O14979	420 aa	Known RBP	12.03	□□□□□ -0.48
TP53-223	ENST00000618944	KIAA0391	O15091	583 aa	Known RBP	12.03	□□□□□ -0.48
TP53-223	ENST00000618944	MAPK13	O15264	365 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	CCND2	P30279	289 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	PDE6C	P51160	858 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	HADHB	P55084	474 aa	Known RBP	12.03	□□□□□ -0.48
TP53-223	ENST00000618944	UBAP2	Q5T6F2	1119 aa	Known RBP	12.03	□□□□□ -0.48
TP53-223	ENST00000618944	EMC10	Q5UCC4	262 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	CCDC137	Q6PK04	289 aa	Known RBP	12.03	□□□□□ -0.48
TP53-223	ENST00000618944	MICALL1	Q8N3F8	863 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	C1orf131	Q8NDD1	294 aa	Known RBP	12.03	□□□□□ -0.48
TP53-223	ENST00000618944	ZNF473	Q8WTR7	871 aa	Known RBP	12.03	□□□□□ -0.48
TP53-223	ENST00000618944	VTI1A	Q96AJ9	217 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	NT5C1B	Q96P26	610 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	TIPIN	Q9BVW5	301 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	MAP3K20	Q9NYL2	800 aa	Known RBP	12.03	□□□□□ -0.48
TP53-223	ENST00000618944	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.03	□□□□□ -0.48
TP53-223	ENST00000618944	HACL1	Q9UJ83	578 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	GJA3	Q9Y6H8	435 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	KIF13B	Q9NQT8	1826 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	FAM187A	A6NFU0	413 aa		12.03	□□□□□ -0.48
TP53-223	ENST00000618944	PHF2	O75151	1096 aa		12.03	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms