RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 GLI1P08151 1106 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 RNASELQ05823 741 aaKnown RBP14.82□□□□□ -0.04
CNOT3-210ENST00000618939 C4orf32Q8N8J7 132 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 CDKL2Q92772 493 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 IFT122Q9HBG6 1241 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 GINM1Q9NU53 330 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 TRAF3IP3Q9Y228 551 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 SLC1A1P43005 524 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 MIIPQ5JXC2 388 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 IZUMO3Q5VZ72 239 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 NME8Q8N427 588 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 GLIS3Q8NEA6 775 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 HDAC7Q8WUI4 952 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 PPP1R16BQ96T49 567 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 APOL6Q9BWW8 343 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 GAKO14976 1311 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 RNF225M0QZC1 329 aaPredicted RBP14.81□□□□□ -0.04
CNOT3-210ENST00000618939 CHUKO15111 745 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 CPP00450 1065 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 AGTP01019 485 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 NR3C2P08235 984 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 COPB2P35606 906 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 ARL4CP56559 192 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 NR1H3Q13133 447 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 MUM1Q2TAK8 710 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 CREG2Q8IUH2 290 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 TTC13Q8NBP0 860 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 GMCL1P1Q8NEA9 526 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 ATL2Q8NHH9 583 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 OLFML3Q9NRN5 406 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 SEPT10Q9P0V9 454 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 CHORDC1Q9UHD1 332 aaPredicted RBP14.81□□□□□ -0.04
CNOT3-210ENST00000618939 SYNJ2BP-COX16A0A087WUM0 186 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 ARP10275 920 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 ZNF568Q3ZCX4 644 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 STYK1Q6J9G0 422 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 EPM2AIP1Q7L775 607 aaPredicted RBP14.81□□□□□ -0.04
CNOT3-210ENST00000618939 IRF2BP1Q8IU81 584 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 C7orf31Q8N865 590 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 TTC25Q96NG3 672 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 MED10Q9BTT4 135 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 NGRNQ9NPE2 291 aaKnown RBP14.81□□□□□ -0.04
CNOT3-210ENST00000618939 COX16Q9P0S2 106 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 STRIP2Q9ULQ0 834 aa14.81□□□□□ -0.04
CNOT3-210ENST00000618939 PJA2O43164 708 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 RPSAP08865 295 aaKnown RBP14.8□□□□□ -0.04
CNOT3-210ENST00000618939 CCDC125Q86Z20 511 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 CYP2W1Q8TAV3 490 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 TMEM8AQ9HCN3 771 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 NID2Q14112 1375 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 MED1Q15648 1581 aaPredicted RBP14.8□□□□□ -0.04
CNOT3-210ENST00000618939 CCDC160A6NGH7 325 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 SSTR3P32745 418 aaPredicted RBP14.8□□□□□ -0.04
CNOT3-210ENST00000618939 ACOT2P49753 483 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 HMGCS2P54868 508 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 GPS1Q13098 491 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 XKR3Q5GH77 459 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 TRIM68Q6AZZ1 485 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 C15orf52Q6ZUT6 534 aaKnown RBP14.8□□□□□ -0.04
CNOT3-210ENST00000618939 DNAAF5Q86Y56 855 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 ACTRT1Q8TDG2 376 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 HSPH1Q92598 858 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 THOC1Q96FV9 657 aaKnown RBP14.8□□□□□ -0.04
CNOT3-210ENST00000618939 GTPBP10A4D1E9 387 aaKnown RBP14.8□□□□□ -0.04
CNOT3-210ENST00000618939 ABL1P00519 1130 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 KCNJ1P48048 391 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 LRRC55Q6ZSA7 311 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 PDZD4Q76G19 769 aaPredicted RBP14.8□□□□□ -0.04
CNOT3-210ENST00000618939 ZNF720Q7Z2F6 126 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 TTC16Q8NEE8 873 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 CPA5Q8WXQ8 436 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 LCMT1Q9UIC8 334 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 F8VZ95 297 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 PDE2AO00408 941 aaPredicted RBP14.8□□□□□ -0.04
CNOT3-210ENST00000618939 EPHB6O15197 1021 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 ZBED1O96006 694 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 MUTP22033 750 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 SESN3P58005 492 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 SNRPFP62306 86 aaKnown RBP14.8□□□□□ -0.04
CNOT3-210ENST00000618939 PDE1BQ01064 536 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 CDO1Q16878 200 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 CAVIN3Q969G5 261 aa14.8□□□□□ -0.04
CNOT3-210ENST00000618939 MYCBPQ99417 103 aaPredicted RBP14.8□□□□□ -0.04
CNOT3-210ENST00000618939 ATF5Q9Y2D1 282 aaPredicted RBP14.8□□□□□ -0.04
CNOT3-210ENST00000618939 FAM86B1E9PN63 330 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 GOLGA8MH3BSY2 632 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 FAM86B2P0C5J1 330 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 CNGA1P29973 690 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 PARVAQ9NVD7 372 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.79□□□□□ -0.04
CNOT3-210ENST00000618939 RCCD1A6NED2 376 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 ARHGAP42A6NI28 874 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 M0QZ92 97 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 TAL1P17542 331 aaPredicted RBP14.79□□□□□ -0.04
CNOT3-210ENST00000618939 RPS6P62753 249 aaKnown RBP14.79□□□□□ -0.04
CNOT3-210ENST00000618939 HP1BP3Q5SSJ5 553 aaPredicted RBP14.79□□□□□ -0.04
CNOT3-210ENST00000618939 SLC30A10Q6XR72 485 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 KDM7AQ6ZMT4 941 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 TRIM42Q8IWZ5 723 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 HACE1Q8IYU2 909 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms