RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 LRRC1Q9BTT6 524 aa27.45■■□□□ 1.99
VEGFC-202ENST00000618562 SELENOOQ9BVL4 669 aa27.45■■□□□ 1.99
VEGFC-202ENST00000618562 ADGRA2Q96PE1 1338 aa27.45■■□□□ 1.99
VEGFC-202ENST00000618562 RBM47A0AV96 593 aaKnown RBP27.45■■□□□ 1.98
VEGFC-202ENST00000618562 ZBTB42B2RXF5 422 aa27.45■■□□□ 1.98
VEGFC-202ENST00000618562 H0YCG3 227 aa27.45■■□□□ 1.98
VEGFC-202ENST00000618562 ZMYND10O75800 440 aa27.45■■□□□ 1.98
VEGFC-202ENST00000618562 SNAI1O95863 264 aaPredicted RBP27.45■■□□□ 1.98
VEGFC-202ENST00000618562 MAPK4P31152 587 aa27.45■■□□□ 1.98
VEGFC-202ENST00000618562 GYS2P54840 703 aa27.45■■□□□ 1.98
VEGFC-202ENST00000618562 PTK2Q05397 1052 aa27.45■■□□□ 1.98
VEGFC-202ENST00000618562 GLE1Q53GS7 698 aaKnown RBP27.45■■□□□ 1.98
VEGFC-202ENST00000618562 ATP8B4Q8TF62 1192 aa27.45■■□□□ 1.98
VEGFC-202ENST00000618562 CPA4Q9UI42 421 aa27.45■■□□□ 1.98
VEGFC-202ENST00000618562 KCNG1Q9UIX4 513 aa27.45■■□□□ 1.98
VEGFC-202ENST00000618562 FAN1Q9Y2M0 1017 aa27.45■■□□□ 1.98
VEGFC-202ENST00000618562 GOLGA8IPA6NC78 632 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 GOLGA8JA6NMD2 632 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 MYBL2P10244 700 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 NAMPTP43490 491 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 VAMP7P51809 220 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 PLCB4Q15147 1175 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 SAPCD2Q86UD0 394 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 PLEKHO2Q8TD55 490 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 KCNN1Q92952 543 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 MAML3Q96JK9 1138 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 PSMB7Q99436 277 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 PPME1Q9Y570 386 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 ZNF236Q9UL36 1845 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 ADRB2P07550 413 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 DRP2Q13474 957 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 BRDTQ58F21 947 aaPredicted RBP27.44■■□□□ 1.98
VEGFC-202ENST00000618562 MEI1Q5TIA1 1274 aa27.44■■□□□ 1.98
VEGFC-202ENST00000618562 AJAP1Q9UKB5 411 aaPredicted RBP27.44■■□□□ 1.98
VEGFC-202ENST00000618562 A0A0U1RQG5 324 aaPredicted RBP27.43■■□□□ 1.98
VEGFC-202ENST00000618562 GRID2IPA4D2P6 1211 aa27.43■■□□□ 1.98
VEGFC-202ENST00000618562 HNRNPDLO14979 420 aaKnown RBP27.43■■□□□ 1.98
VEGFC-202ENST00000618562 TNFRSF8P28908 595 aa27.43■■□□□ 1.98
VEGFC-202ENST00000618562 ABCD1P33897 745 aa27.43■■□□□ 1.98
VEGFC-202ENST00000618562 JAM2P57087 298 aa27.43■■□□□ 1.98
VEGFC-202ENST00000618562 C1orf220Q5T0J3 134 aa27.43■■□□□ 1.98
VEGFC-202ENST00000618562 ZNF571Q7Z3V5 609 aaPredicted RBP27.43■■□□□ 1.98
VEGFC-202ENST00000618562 CBWD2Q8IUF1 395 aa27.43■■□□□ 1.98
VEGFC-202ENST00000618562 SAAL1Q96ER3 474 aa27.43■■□□□ 1.98
VEGFC-202ENST00000618562 CALCOCO1Q9P1Z2 691 aa27.43■■□□□ 1.98
VEGFC-202ENST00000618562 DOCK3Q8IZD9 2030 aa27.43■■□□□ 1.98
VEGFC-202ENST00000618562 MANSC4A6NHS7 340 aaPredicted RBP27.42■■□□□ 1.98
VEGFC-202ENST00000618562 MYL7Q01449 175 aa27.42■■□□□ 1.98
VEGFC-202ENST00000618562 SMARCAD1Q9H4L7 1026 aa27.42■■□□□ 1.98
VEGFC-202ENST00000618562 STIM2Q9P246 746 aa27.42■■□□□ 1.98
VEGFC-202ENST00000618562 DMGDHQ9UI17 866 aaKnown RBP27.42■■□□□ 1.98
VEGFC-202ENST00000618562 LRRIQ4A6NIV6 560 aa27.42■■□□□ 1.98
VEGFC-202ENST00000618562 ADCYAP1R1P41586 468 aa27.42■■□□□ 1.98
VEGFC-202ENST00000618562 MCCD1P59942 119 aaPredicted RBP27.42■■□□□ 1.98
VEGFC-202ENST00000618562 LAMC2Q13753 1193 aa27.42■■□□□ 1.98
VEGFC-202ENST00000618562 SNRNP35Q16560 246 aaKnown RBP27.42■■□□□ 1.98
VEGFC-202ENST00000618562 PACSIN1Q9BY11 444 aa27.42■■□□□ 1.98
VEGFC-202ENST00000618562 SLC26A2P50443 739 aa27.41■■□□□ 1.98
VEGFC-202ENST00000618562 PPP3CAQ08209 521 aa27.41■■□□□ 1.98
VEGFC-202ENST00000618562 ENOX2Q16206 610 aaKnown RBP27.41■■□□□ 1.98
VEGFC-202ENST00000618562 IFI16Q16666 785 aaKnown RBP27.41■■□□□ 1.98
VEGFC-202ENST00000618562 RGMBQ6NW40 437 aa27.41■■□□□ 1.98
VEGFC-202ENST00000618562 GJB7Q6PEY0 223 aa27.41■■□□□ 1.98
VEGFC-202ENST00000618562 NPLOC4Q8TAT6 608 aa27.41■■□□□ 1.98
VEGFC-202ENST00000618562 DEPTORQ8TB45 409 aa27.41■■□□□ 1.98
VEGFC-202ENST00000618562 POMGNT1Q8WZA1 660 aa27.41■■□□□ 1.98
VEGFC-202ENST00000618562 BICD1Q96G01 975 aa27.41■■□□□ 1.98
VEGFC-202ENST00000618562 FBXL18Q96ME1 805 aa27.41■■□□□ 1.98
VEGFC-202ENST00000618562 SLC15A5A6NIM6 579 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 CES2O00748 559 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 GH1P01241 217 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 CAPSQ13938 189 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 C8orf74Q6P047 294 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 VPS36Q86VN1 386 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 GSPT2Q8IYD1 628 aaKnown RBP27.4■■□□□ 1.98
VEGFC-202ENST00000618562 HDAC7Q8WUI4 952 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 RBM12Q9NTZ6 932 aaKnown RBP27.4■■□□□ 1.98
VEGFC-202ENST00000618562 NAGPAQ9UK23 515 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.4■■□□□ 1.98
VEGFC-202ENST00000618562 SYF2O95926 243 aaKnown RBP27.4■■□□□ 1.98
VEGFC-202ENST00000618562 LMAN1P49257 510 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 MKRN4PQ13434 485 aaPredicted RBP27.4■■□□□ 1.98
VEGFC-202ENST00000618562 SMARCAL1Q9NZC9 954 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 EHD2Q9NZN4 543 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 NENFQ9UMX5 172 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 USP20Q9Y2K6 914 aa27.4■■□□□ 1.98
VEGFC-202ENST00000618562 IGKV6-21A0A0C4DH24 114 aa27.39■■□□□ 1.98
VEGFC-202ENST00000618562 FTCDO95954 541 aa27.39■■□□□ 1.98
VEGFC-202ENST00000618562 GARTP22102 1010 aa27.39■■□□□ 1.98
VEGFC-202ENST00000618562 SCP2P22307 547 aa27.39■■□□□ 1.98
VEGFC-202ENST00000618562 MATR3P43243 847 aaKnown RBP eCLIP27.39■■□□□ 1.98
VEGFC-202ENST00000618562 TAF1CQ15572 869 aaPredicted RBP27.39■■□□□ 1.98
VEGFC-202ENST00000618562 PRPF31Q8WWY3 499 aaKnown RBP27.39■■□□□ 1.98
VEGFC-202ENST00000618562 EMID1Q96A84 441 aaPredicted RBP27.39■■□□□ 1.98
VEGFC-202ENST00000618562 TINF2Q9BSI4 451 aa27.39■■□□□ 1.98
VEGFC-202ENST00000618562 INTS2Q9H0H0 1204 aaKnown RBP27.39■■□□□ 1.98
VEGFC-202ENST00000618562 PASKQ96RG2 1323 aa27.39■■□□□ 1.97
VEGFC-202ENST00000618562 EPHB4P54760 987 aa27.39■■□□□ 1.97
VEGFC-202ENST00000618562 STRN3Q13033 797 aa27.39■■□□□ 1.97
VEGFC-202ENST00000618562 LMO3Q8TAP4 145 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms