RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 PPM1JQ5JR12 505 aa13.4□□□□□ -0.26
COL4A2-210ENST00000617564 CPLX2Q6PUV4 134 aaKnown RBP13.4□□□□□ -0.26
COL4A2-210ENST00000617564 C4orf19Q8IY42 314 aa13.4□□□□□ -0.26
COL4A2-210ENST00000617564 COLGALT2Q8IYK4 626 aa13.4□□□□□ -0.26
COL4A2-210ENST00000617564 GPR65Q8IYL9 337 aa13.4□□□□□ -0.26
COL4A2-210ENST00000617564 NAP1L4Q99733 375 aaKnown RBP13.4□□□□□ -0.26
COL4A2-210ENST00000617564 MINDY3Q9H8M7 445 aa13.4□□□□□ -0.26
COL4A2-210ENST00000617564 KCNMB3Q9NPA1 279 aa13.4□□□□□ -0.26
COL4A2-210ENST00000617564 PRG3Q9Y2Y8 225 aaPredicted RBP13.4□□□□□ -0.26
COL4A2-210ENST00000617564 FANCMQ8IYD8 2048 aa13.4□□□□□ -0.26
COL4A2-210ENST00000617564 CCDC195A0A1B0GUA6 201 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 SOBPA7XYQ1 873 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 C2CD2LO14523 706 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 TBX3O15119 743 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 TEX28O15482 410 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 EPB41L2O43491 1005 aaKnown RBP13.39□□□□□ -0.27
COL4A2-210ENST00000617564 N4BP1O75113 896 aaKnown RBP13.39□□□□□ -0.27
COL4A2-210ENST00000617564 POMCP01189 267 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 SRGAP2CP0DJJ0 459 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 SRFP11831 508 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 RFX1P22670 979 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 GBP2P32456 591 aaPredicted RBP13.39□□□□□ -0.27
COL4A2-210ENST00000617564 OR1G1P47890 313 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 AFF1P51825 1210 aaKnown RBP13.39□□□□□ -0.27
COL4A2-210ENST00000617564 DSG1Q02413 1049 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 TOB2Q14106 344 aaPredicted RBP13.39□□□□□ -0.27
COL4A2-210ENST00000617564 EMC2Q15006 297 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 EPHA7Q15375 998 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 INF2Q27J81 1249 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 PPP4R3AQ6IN85 833 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 NOTUMQ6P988 496 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 OTUD6AQ7L8S5 288 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 NEK8Q86SG6 692 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 IFNLR1Q8IU57 520 aaPredicted RBP13.39□□□□□ -0.27
COL4A2-210ENST00000617564 RNF149Q8NC42 400 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 SMG8Q8ND04 991 aaKnown RBP13.39□□□□□ -0.27
COL4A2-210ENST00000617564 TMEM143Q96AN5 459 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 ZNF274Q96GC6 653 aaPredicted RBP13.39□□□□□ -0.27
COL4A2-210ENST00000617564 PLEKHA4Q9H4M7 779 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL4A2-210ENST00000617564 ZDHHC7Q9NXF8 308 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 ANGPTL2Q9UKU9 493 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 ZMYM2Q9UBW7 1377 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 GPR179Q6PRD1 2367 aa13.39□□□□□ -0.27
COL4A2-210ENST00000617564 CCDC194A0A1B0GVG4 234 aa13.38□□□□□ -0.27
COL4A2-210ENST00000617564 NARSO43776 548 aaKnown RBP13.38□□□□□ -0.27
COL4A2-210ENST00000617564 NR1I2O75469 434 aa13.38□□□□□ -0.27
COL4A2-210ENST00000617564 YWHABP31946 246 aaKnown RBP13.38□□□□□ -0.27
COL4A2-210ENST00000617564 CREMQ03060 361 aa13.38□□□□□ -0.27
COL4A2-210ENST00000617564 MXD4Q14582 209 aaPredicted RBP13.38□□□□□ -0.27
COL4A2-210ENST00000617564 RUFY3Q7L099 469 aa13.38□□□□□ -0.27
COL4A2-210ENST00000617564 FERMT3Q86UX7 667 aa13.38□□□□□ -0.27
COL4A2-210ENST00000617564 HACE1Q8IYU2 909 aa13.38□□□□□ -0.27
COL4A2-210ENST00000617564 ZNF579Q8NAF0 562 aaKnown RBP13.38□□□□□ -0.27
COL4A2-210ENST00000617564 SMG7Q92540 1137 aaKnown RBP13.38□□□□□ -0.27
COL4A2-210ENST00000617564 SECISBP2LQ93073 1101 aaKnown RBP13.38□□□□□ -0.27
COL4A2-210ENST00000617564 MTRQ99707 1265 aa13.38□□□□□ -0.27
COL4A2-210ENST00000617564 LXNQ9BS40 222 aa13.38□□□□□ -0.27
COL4A2-210ENST00000617564 WRAP73Q9P2S5 460 aaPredicted RBP13.38□□□□□ -0.27
COL4A2-210ENST00000617564 IPPQ9Y573 584 aa13.38□□□□□ -0.27
COL4A2-210ENST00000617564 KRBA1A5PL33 1030 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 ARL5CA6NH57 179 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 TSPAN1O60635 241 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 CFHP08603 1231 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 MLH1P40692 756 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 PTENP60484 403 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 POU5F1BQ06416 359 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 NCBP1Q09161 790 aaKnown RBP13.37□□□□□ -0.27
COL4A2-210ENST00000617564 TFDP1Q14186 410 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 PHLDB3Q6NSJ2 640 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 TAS1R1Q7RTX1 841 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 ZNF707Q96C28 371 aaPredicted RBP13.37□□□□□ -0.27
COL4A2-210ENST00000617564 MYADMQ96S97 322 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 GAD1Q99259 594 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 COLEC11Q9BWP8 271 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 CSRNP2Q9H175 543 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 SLKQ9H2G2 1235 aaPredicted RBP13.37□□□□□ -0.27
COL4A2-210ENST00000617564 ZSWIM4Q9H7M6 989 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 ZSWIM6Q9HCJ5 1215 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 CHST7Q9NS84 486 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL4A2-210ENST00000617564 FNIP2Q9P278 1114 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 USP18Q9UMW8 372 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 GIT1Q9Y2X7 761 aa13.37□□□□□ -0.27
COL4A2-210ENST00000617564 RFPL2O75678 378 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 CDKL5O76039 1030 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 XBP1P17861 261 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 SCNN1GP51170 649 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 XKR9Q5GH70 373 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 SPECC1Q5M775 1068 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 FUT10Q6P4F1 479 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 C1orf210Q8IVY1 113 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 SLFN12Q8IYM2 578 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 SLC44A3Q8N4M1 653 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 RSAD2Q8WXG1 361 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 HAS1Q92839 578 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 AIFM3Q96NN9 605 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 PHF20Q9BVI0 1012 aa13.36□□□□□ -0.27
COL4A2-210ENST00000617564 EIF2AQ9BY44 585 aaKnown RBP13.36□□□□□ -0.27
COL4A2-210ENST00000617564 NFKBIZQ9BYH8 718 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms