RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 TMEM134Q9H6X4 195 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 RAB20Q9NX57 234 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 NOCTQ9UK39 431 aaKnown RBP16.98■□□□□ 0.31
NR1H3-235ENST00000616973 ZMYND10O75800 440 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 GZMAP12544 262 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 DMTNQ08495 405 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 SLFN12LQ6IEE8 588 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 C15orf39Q6ZRI6 1047 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 SV2AQ7L0J3 742 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 ENOSF1Q7L5Y1 443 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 DAAM2Q86T65 1068 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 RHOT2Q8IXI1 618 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 PPM1KQ8N3J5 372 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 EPS8L1Q8TE68 723 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 HDAC7Q8WUI4 952 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 SEPT1Q8WYJ6 367 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 PAGR1Q9BTK6 254 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 TAS2R14Q9NYV8 317 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 AMFRQ9UKV5 643 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 DIS3Q9Y2L1 958 aaKnown RBP16.98■□□□□ 0.31
NR1H3-235ENST00000616973 MCM3APO60318 1980 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 TMCO5BA8MYB1 307 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 RTN2O75298 545 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 MYBL2P10244 700 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 STAT5BP51692 787 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 PRPF4BQ13523 1007 aaKnown RBP16.97■□□□□ 0.31
NR1H3-235ENST00000616973 MOGSQ13724 837 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 PSMD6Q15008 389 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 C9orf131Q5VYM1 1079 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 FASTKD5Q7L8L6 764 aaKnown RBP16.97■□□□□ 0.31
NR1H3-235ENST00000616973 PALB2Q86YC2 1186 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 RPUSD2Q8IZ73 545 aaKnown RBP16.97■□□□□ 0.31
NR1H3-235ENST00000616973 RASGEF1CQ8N431 466 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 METTL13Q8N6R0 699 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 TAS1R2Q8TE23 839 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 SCFD2Q8WU76 684 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 PSPC1Q8WXF1 523 aaKnown RBP16.97■□□□□ 0.31
NR1H3-235ENST00000616973 KAT5Q92993 513 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 TMEM143Q96AN5 459 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 FAM167AQ96KS9 214 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 POP1Q99575 1024 aaKnown RBP16.97■□□□□ 0.31
NR1H3-235ENST00000616973 FAM213AQ9BRX8 229 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 PDE11AQ9HCR9 933 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 SCN4AP35499 1836 aa16.97■□□□□ 0.31
NR1H3-235ENST00000616973 DNAJC25-GNG10A0A024R161 153 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 LOC102724159A0A0B4J2E5 919 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 H3BQF6 201 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 BUB1BO60566 1050 aaPredicted RBP16.96■□□□□ 0.31
NR1H3-235ENST00000616973 SGPL1O95470 568 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 CHRNB2P17787 502 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 OSBPP22059 807 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 DNA2P51530 1060 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 TNNC1P63316 161 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 GCNT1Q02742 428 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 PWP2Q15269 919 aaKnown RBP16.96■□□□□ 0.31
NR1H3-235ENST00000616973 DEPTORQ8TB45 409 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 ARHGEF26Q96DR7 871 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 FGD4Q96M96 766 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 THAP2Q9H0W7 228 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 GOLPH3Q9H4A6 298 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 OSGEPQ9NPF4 335 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 TOPORSQ9NS56 1045 aaPredicted RBP16.96■□□□□ 0.31
NR1H3-235ENST00000616973 SEPT11Q9NVA2 429 aaKnown RBP16.96■□□□□ 0.31
NR1H3-235ENST00000616973 RBPJLQ9UBG7 517 aa16.96■□□□□ 0.31
NR1H3-235ENST00000616973 K7ERI5 159 aa16.96■□□□□ 0.3
NR1H3-235ENST00000616973 SOCS7O14512 581 aa16.96■□□□□ 0.3
NR1H3-235ENST00000616973 MAFO75444 373 aaPredicted RBP16.96■□□□□ 0.3
NR1H3-235ENST00000616973 GGPS1O95749 300 aa16.96■□□□□ 0.3
NR1H3-235ENST00000616973 LDHAP00338 332 aaKnown RBP16.96■□□□□ 0.3
NR1H3-235ENST00000616973 ABCB4P21439 1286 aa16.96■□□□□ 0.3
NR1H3-235ENST00000616973 AARSP49588 968 aaKnown RBP eCLIP16.96■□□□□ 0.3
NR1H3-235ENST00000616973 DPY19L2Q6NUT2 758 aa16.96■□□□□ 0.3
NR1H3-235ENST00000616973 NOP9Q86U38 636 aaKnown RBP16.96■□□□□ 0.3
NR1H3-235ENST00000616973 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.96■□□□□ 0.33e-7■■■□□ 18.1
NR1H3-235ENST00000616973 GDF3Q9NR23 364 aa16.96■□□□□ 0.3
NR1H3-235ENST00000616973 AGO2Q9UKV8 859 aaKnown RBP16.96■□□□□ 0.3
NR1H3-235ENST00000616973 TTC7AQ9ULT0 858 aaPredicted RBP16.96■□□□□ 0.3
NR1H3-235ENST00000616973 PGRMC1O00264 195 aaKnown RBP16.95■□□□□ 0.3
NR1H3-235ENST00000616973 CEP104O60308 925 aa16.95■□□□□ 0.3
NR1H3-235ENST00000616973 FTLP02792 175 aaPredicted RBP16.95■□□□□ 0.3
NR1H3-235ENST00000616973 TCF7P36402 384 aaPredicted RBP16.95■□□□□ 0.3
NR1H3-235ENST00000616973 EPHB4P54760 987 aa16.95■□□□□ 0.3
NR1H3-235ENST00000616973 GPC5P78333 572 aa16.95■□□□□ 0.3
NR1H3-235ENST00000616973 SLC7A5Q01650 507 aa16.95■□□□□ 0.3
NR1H3-235ENST00000616973 IFT20Q8IY31 132 aa16.95■□□□□ 0.3
NR1H3-235ENST00000616973 MED4Q9NPJ6 270 aa16.95■□□□□ 0.3
NR1H3-235ENST00000616973 HPCAL4Q9UM19 191 aa16.95■□□□□ 0.3
NR1H3-235ENST00000616973 PLXNA1Q9UIW2 1896 aa16.95■□□□□ 0.3
NR1H3-235ENST00000616973 LRRIQ4A6NIV6 560 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 CCDC188H7C350 402 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 CYP26A1O43174 497 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 LGR5O75473 907 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 MTA2O94776 668 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 DLATP10515 647 aaKnown RBP16.94■□□□□ 0.3
NR1H3-235ENST00000616973 USP8P40818 1118 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 TNNT3P45378 269 aaPredicted RBP16.94■□□□□ 0.3
NR1H3-235ENST00000616973 TTLL12Q14166 644 aaPredicted RBP16.94■□□□□ 0.3
NR1H3-235ENST00000616973 EMBQ6PCB8 327 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 MOB2Q70IA6 237 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 EXOC8Q8IYI6 725 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms