RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 RIPOR3Q96MK2 946 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 CUEDC2Q9H467 287 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 GOLPH3LQ9H4A5 285 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 LMBRD1Q9NUN5 540 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 FAM86C1Q9NVL1 165 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 USP25Q9UHP3 1055 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 DBR1Q9UK59 544 aaKnown RBP16.41■□□□□ 0.22
UBXN1-218ENST00000616865 SORCS3Q9UPU3 1222 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 NT5C1B-RDH14C9J2C7 533 aa16.4■□□□□ 0.22
UBXN1-218ENST00000616865 CSDE1O75534 798 aaKnown RBP16.4■□□□□ 0.22
UBXN1-218ENST00000616865 PLA2G4BP0C869 781 aa16.4■□□□□ 0.22
UBXN1-218ENST00000616865 CA8P35219 290 aa16.4■□□□□ 0.22
UBXN1-218ENST00000616865 ALDH7A1P49419 539 aaKnown RBP16.4■□□□□ 0.22
UBXN1-218ENST00000616865 FAM160A1Q05DH4 1040 aa16.4■□□□□ 0.22
UBXN1-218ENST00000616865 SV2BQ7L1I2 683 aa16.4■□□□□ 0.22
UBXN1-218ENST00000616865 TMEM173Q86WV6 379 aaPredicted RBP16.4■□□□□ 0.22
UBXN1-218ENST00000616865 UBALD2Q8IYN6 164 aa16.4■□□□□ 0.22
UBXN1-218ENST00000616865 LARP4BQ92615 738 aaKnown RBP16.4■□□□□ 0.22
UBXN1-218ENST00000616865 RAD54LQ92698 747 aa16.4■□□□□ 0.22
UBXN1-218ENST00000616865 TRAIPQ9BWF2 469 aa16.4■□□□□ 0.22
UBXN1-218ENST00000616865 GCOM2Q9BZD3 368 aaPredicted RBP16.4■□□□□ 0.22
UBXN1-218ENST00000616865 ZBP1Q9H171 429 aa16.4■□□□□ 0.22
UBXN1-218ENST00000616865 IRF2BPLQ9H1B7 796 aa16.4■□□□□ 0.22
UBXN1-218ENST00000616865 BHMT2Q9H2M3 363 aa16.4■□□□□ 0.22
UBXN1-218ENST00000616865 CHST12Q9NRB3 414 aa16.4■□□□□ 0.22
UBXN1-218ENST00000616865 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.39■□□□□ 0.21
UBXN1-218ENST00000616865 TMEM150BA6NC51 233 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 ZBTB39O15060 712 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 GFRA3O60609 400 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 KINO60870 393 aaKnown RBP16.39■□□□□ 0.21
UBXN1-218ENST00000616865 ZC3H11AO75152 810 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBXN1-218ENST00000616865 KRT18P05783 430 aaKnown RBP16.39■□□□□ 0.21
UBXN1-218ENST00000616865 SFPQP23246 707 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBXN1-218ENST00000616865 MTHFRP42898 656 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 PHKA2P46019 1235 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 NUBP1P53384 320 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 POLGP54098 1239 aaPredicted RBP16.39■□□□□ 0.21
UBXN1-218ENST00000616865 NPEPPSP55786 919 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 MCM6Q14566 821 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 BMS1Q14692 1282 aaKnown RBP16.39■□□□□ 0.21
UBXN1-218ENST00000616865 KIAA1841Q6NSI8 718 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 ANO5Q75V66 913 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 EXOC8Q8IYI6 725 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 CNNM3Q8NE01 707 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 NIFKQ9BYG3 293 aaKnown RBP16.39■□□□□ 0.21
UBXN1-218ENST00000616865 LRRC27Q9C0I9 530 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 MAGEF1Q9HAY2 307 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 CYP26B1Q9NR63 512 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 DZANK1Q9NVP4 752 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 SERTAD1Q9UHV2 236 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 HPSEQ9Y251 543 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 PPME1Q9Y570 386 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 IRAK3Q9Y616 596 aa16.39■□□□□ 0.21
UBXN1-218ENST00000616865 A0A087WZ62 844 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 A0A087X0B3 334 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 IGKV6-21A0A0C4DH24 114 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 FAM237AA0A1B0GTK4 181 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 CARNS1A5YM72 827 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 ZNF202O95125 648 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 STBD1O95210 358 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 LIG1P18858 919 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 RARRES1P49788 294 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 CDC42EP1Q00587 391 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 AMPD3Q01432 767 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 RARS2Q5T160 578 aaKnown RBP16.38■□□□□ 0.21
UBXN1-218ENST00000616865 KCNK18Q7Z418 384 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 GPBP1Q86WP2 473 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 VPS52Q8N1B4 723 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 TDRD5Q8NAT2 981 aaKnown RBP16.38■□□□□ 0.21
UBXN1-218ENST00000616865 SLC7A3Q8WY07 619 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 ATOH1Q92858 354 aaPredicted RBP16.38■□□□□ 0.21
UBXN1-218ENST00000616865 LPPQ93052 612 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 CEP89Q96ST8 783 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 JPH2Q9BR39 696 aaPredicted RBP16.38■□□□□ 0.21
UBXN1-218ENST00000616865 SH2D3AQ9BRG2 576 aa16.38■□□□□ 0.21
UBXN1-218ENST00000616865 FDXACB1Q9BRP7 624 aaPredicted RBP16.38■□□□□ 0.21
UBXN1-218ENST00000616865 BMP2KQ9NSY1 1161 aaPredicted RBP16.38■□□□□ 0.21
UBXN1-218ENST00000616865 HOOK1Q9UJC3 728 aaKnown RBP16.38■□□□□ 0.21
UBXN1-218ENST00000616865 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.37■□□□□ 0.21
UBXN1-218ENST00000616865 H0Y858 1186 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 USO1O60763 962 aaKnown RBP16.37■□□□□ 0.21
UBXN1-218ENST00000616865 CXCL14O95715 111 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 MBD3O95983 291 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 WEE2P0C1S8 567 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 SLFN14P0C7P3 912 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 CTSAP10619 480 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 RFC5P40937 340 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 GIT2Q14161 759 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 TWF2Q6IBS0 349 aaKnown RBP16.37■□□□□ 0.21
UBXN1-218ENST00000616865 KANK3Q6NY19 840 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 PADI6Q6TGC4 694 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 DDX53Q86TM3 631 aaKnown RBP16.37■□□□□ 0.21
UBXN1-218ENST00000616865 ZNF410Q86VK4 478 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 FMR1NBQ8N0W7 255 aaPredicted RBP16.37■□□□□ 0.21
UBXN1-218ENST00000616865 C12orf76Q8N812 135 aaPredicted RBP16.37■□□□□ 0.21
UBXN1-218ENST00000616865 SYT2Q8N9I0 419 aaPredicted RBP16.37■□□□□ 0.21
UBXN1-218ENST00000616865 AUTS2Q8WXX7 1259 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 IGSF21Q96ID5 467 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 SMOC2Q9H3U7 446 aa16.37■□□□□ 0.21
UBXN1-218ENST00000616865 BLOC1S4Q9NUP1 217 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms