RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 ZNF608Q9ULD9 1512 aaPredicted RBP4.79□□□□□ -1.64
CBWD1-224ENST00000616803 MTSS1O43312 755 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 NPEPPSP55786 919 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 DHCR24Q15392 516 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 SDE2Q6IQ49 451 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 GPRIN1Q7Z2K8 1008 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 MRGPREQ86SM8 312 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 VRK3Q8IV63 474 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 GSPT2Q8IYD1 628 aaKnown RBP4.79□□□□□ -1.64
CBWD1-224ENST00000616803 RPUSD2Q8IZ73 545 aaKnown RBP4.79□□□□□ -1.64
CBWD1-224ENST00000616803 ANKRD35Q8N283 1001 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 REPS2Q8NFH8 660 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 FBXO18Q8NFZ0 1043 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 TSPEARQ8WU66 669 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 ST8SIA2Q92186 375 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 CHFRQ96EP1 664 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 TRIM8Q9BZR9 551 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 SYNPO2Q9UMS6 1093 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 NOC2LQ9Y3T9 749 aaKnown RBP4.79□□□□□ -1.64
CBWD1-224ENST00000616803 CDY2AQ9Y6F7 541 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 CCDC18Q5T9S5 1454 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 FGD6Q6ZV73 1430 aa4.79□□□□□ -1.64
CBWD1-224ENST00000616803 RAB3GAP2Q9H2M9 1393 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 MAGI3Q5TCQ9 1506 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 KIAA0586Q9BVV6 1533 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 TCOF1Q13428 1488 aaKnown RBP4.78□□□□□ -1.64
CBWD1-224ENST00000616803 CTSSP25774 331 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 CDK17Q00537 523 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 SART3Q15020 963 aaKnown RBP4.78□□□□□ -1.64
CBWD1-224ENST00000616803 RABL3Q5HYI8 236 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 MFSD14BQ5SR56 506 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 METRNLQ641Q3 311 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 Q6ZVL8 140 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 DDX46Q7L014 1031 aaKnown RBP4.78□□□□□ -1.64
CBWD1-224ENST00000616803 HDGFL2Q7Z4V5 671 aaPredicted RBP4.78□□□□□ -1.64
CBWD1-224ENST00000616803 AFAP1L2Q8N4X5 818 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 SLC35B2Q8TB61 432 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 ARL8AQ96BM9 186 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 DPP7Q9UHL4 492 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 KIAA0556O60303 1618 aa4.78□□□□□ -1.64
CBWD1-224ENST00000616803 GRIN2AQ12879 1464 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 NCOA2Q15596 1464 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 MAGI1Q96QZ7 1491 aaPredicted RBP4.77□□□□□ -1.65
CBWD1-224ENST00000616803 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.77□□□□□ -1.65
CBWD1-224ENST00000616803 LPXNO60711 386 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 COL10A1Q03692 680 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 CNGB1Q14028 1251 aaPredicted RBP4.77□□□□□ -1.65
CBWD1-224ENST00000616803 MAN2A1Q16706 1144 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 NAIF1Q69YI7 327 aaPredicted RBP4.77□□□□□ -1.65
CBWD1-224ENST00000616803 RHOUQ7L0Q8 258 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 OR52N2Q8NGI0 321 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 GPR150Q8NGU9 434 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 MDM1Q8TC05 714 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 ZNF483Q8TF39 744 aaPredicted RBP4.77□□□□□ -1.65
CBWD1-224ENST00000616803 COG1Q8WTW3 980 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 LMBR1Q8WVP7 490 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 USP7Q93009 1102 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 AGAP2Q99490 1192 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 NEU1Q99519 415 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 CPPED1Q9BRF8 314 aaPredicted RBP4.77□□□□□ -1.65
CBWD1-224ENST00000616803 KCNH6Q9H252 994 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 IFT22Q9H7X7 185 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 SORCS3Q9UPU3 1222 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 MYOM3Q5VTT5 1437 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 EPRSP07814 1512 aaKnown RBP4.77□□□□□ -1.65
CBWD1-224ENST00000616803 DISP1Q96F81 1524 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 GCC2Q8IWJ2 1684 aa4.77□□□□□ -1.65
CBWD1-224ENST00000616803 PNPLA7Q6ZV29 1317 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 PTPN23Q9H3S7 1636 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 ST20-MTHFSA0A0A6YYL1 179 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 CCDC78A2IDD5 438 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 ZNF185O15231 689 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 IGSF3O75054 1194 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 DNAJC6O75061 913 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 MFAP3LO75121 409 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 LTA4HP09960 611 aaKnown RBP4.76□□□□□ -1.65
CBWD1-224ENST00000616803 APOBEC3AP31941 199 aaPredicted RBP4.76□□□□□ -1.65
CBWD1-224ENST00000616803 SCAND1P57086 179 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 PPP3CAQ08209 521 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 ABHD18Q0P651 414 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 STAT4Q14765 748 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 KCNK18Q7Z418 384 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 SNX33Q8WV41 574 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 QRSL1Q9H0R6 528 aaKnown RBP4.76□□□□□ -1.65
CBWD1-224ENST00000616803 NRDE2Q9H7Z3 1164 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 DMRT3Q9NQL9 472 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 PARPBPQ9NWS1 579 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.76□□□□□ -1.65
CBWD1-224ENST00000616803 REXO2Q9Y3B8 237 aaKnown RBP4.76□□□□□ -1.65
CBWD1-224ENST00000616803 COL4A3Q01955 1670 aa4.76□□□□□ -1.65
CBWD1-224ENST00000616803 CEP170Q5SW79 1584 aa4.75□□□□□ -1.65
CBWD1-224ENST00000616803 HFM1A2PYH4 1435 aa4.75□□□□□ -1.65
CBWD1-224ENST00000616803 PTPRKQ15262 1439 aa4.75□□□□□ -1.65
CBWD1-224ENST00000616803 AKNAQ7Z591 1439 aa4.75□□□□□ -1.65
CBWD1-224ENST00000616803 PRAMEF4O60810 478 aa4.75□□□□□ -1.65
CBWD1-224ENST00000616803 RAB11FIP3O75154 756 aa4.75□□□□□ -1.65
CBWD1-224ENST00000616803 ITGA10O75578 1167 aa4.75□□□□□ -1.65
CBWD1-224ENST00000616803 PRKD3O94806 890 aa4.75□□□□□ -1.65
CBWD1-224ENST00000616803 ADSLP30566 484 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms