RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 MAEAQ7L5Y9 396 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 HACE1Q8IYU2 909 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 GSTCDQ8NEC7 633 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 FAM86C1Q9NVL1 165 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 PPP4R2Q9NY27 417 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 SSX2IPQ9Y2D8 614 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 ADH1AP07327 375 aa23.04■■□□□ 1.28
TRAPPC3-208ENST00000616074 XRCC6P12956 609 aaKnown RBP eCLIP23.04■■□□□ 1.28
TRAPPC3-208ENST00000616074 MCM7P33993 719 aa23.04■■□□□ 1.28
TRAPPC3-208ENST00000616074 SLC27A1Q6PCB7 646 aa23.04■■□□□ 1.28
TRAPPC3-208ENST00000616074 ACSF2Q96CM8 615 aaPredicted RBP23.04■■□□□ 1.28
TRAPPC3-208ENST00000616074 RXFP1Q9HBX9 757 aa23.04■■□□□ 1.28
TRAPPC3-208ENST00000616074 MTCL1Q9Y4B5 1905 aaKnown RBP23.04■■□□□ 1.28
TRAPPC3-208ENST00000616074 CACNA1HO95180 2353 aa23.04■■□□□ 1.28
TRAPPC3-208ENST00000616074 DMDP11532 3685 aa23.03■■□□□ 1.28
TRAPPC3-208ENST00000616074 A0A1B0GUA9 196 aa23.03■■□□□ 1.28
TRAPPC3-208ENST00000616074 LRRIQ4A6NIV6 560 aa23.03■■□□□ 1.28
TRAPPC3-208ENST00000616074 MED24O75448 989 aa23.03■■□□□ 1.28
TRAPPC3-208ENST00000616074 GUCY1B3Q02153 619 aa23.03■■□□□ 1.28
TRAPPC3-208ENST00000616074 DSG1Q02413 1049 aa23.03■■□□□ 1.28
TRAPPC3-208ENST00000616074 OTOP3Q7RTS5 596 aa23.03■■□□□ 1.28
TRAPPC3-208ENST00000616074 CATSPER3Q86XQ3 398 aa23.03■■□□□ 1.28
TRAPPC3-208ENST00000616074 CMASQ8NFW8 434 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC3-208ENST00000616074 B3GALT6Q96L58 329 aa23.03■■□□□ 1.28
TRAPPC3-208ENST00000616074 TUFT1Q9NNX1 390 aa23.03■■□□□ 1.28
TRAPPC3-208ENST00000616074 KLK14Q9P0G3 267 aa23.03■■□□□ 1.28
TRAPPC3-208ENST00000616074 NR1I2O75469 434 aa23.02■■□□□ 1.28
TRAPPC3-208ENST00000616074 GLUD1P00367 558 aa23.02■■□□□ 1.28
TRAPPC3-208ENST00000616074 MYBP10242 640 aa23.02■■□□□ 1.28
TRAPPC3-208ENST00000616074 PPP4R3CPQ6ZMV5 832 aa23.02■■□□□ 1.28
TRAPPC3-208ENST00000616074 TMEM105Q8N8V8 129 aa23.02■■□□□ 1.28
TRAPPC3-208ENST00000616074 COLEC11Q9BWP8 271 aa23.02■■□□□ 1.28
TRAPPC3-208ENST00000616074 CHST7Q9NS84 486 aa23.02■■□□□ 1.28
TRAPPC3-208ENST00000616074 PARP2Q9UGN5 583 aa23.02■■□□□ 1.28
TRAPPC3-208ENST00000616074 ZMYM2Q9UBW7 1377 aa23.01■■□□□ 1.27
TRAPPC3-208ENST00000616074 NUBP1P53384 320 aa23.01■■□□□ 1.27
TRAPPC3-208ENST00000616074 GRIK3Q13003 919 aa23.01■■□□□ 1.27
TRAPPC3-208ENST00000616074 CDCA2Q69YH5 1023 aaPredicted RBP23.01■■□□□ 1.27
TRAPPC3-208ENST00000616074 FUT10Q6P4F1 479 aa23.01■■□□□ 1.27
TRAPPC3-208ENST00000616074 MCPH1Q8NEM0 835 aa23.01■■□□□ 1.27
TRAPPC3-208ENST00000616074 RABGGTAQ92696 567 aa23.01■■□□□ 1.27
TRAPPC3-208ENST00000616074 PRIMPOLQ96LW4 560 aa23.01■■□□□ 1.27
TRAPPC3-208ENST00000616074 GPR62Q9BZJ7 368 aa23.01■■□□□ 1.27
TRAPPC3-208ENST00000616074 PRMT7Q9NVM4 692 aaPredicted RBP23.01■■□□□ 1.27
TRAPPC3-208ENST00000616074 CCDC195A0A1B0GUA6 201 aa23■■□□□ 1.27
TRAPPC3-208ENST00000616074 H0Y858 1186 aa23■■□□□ 1.27
TRAPPC3-208ENST00000616074 GALR2O43603 387 aaPredicted RBP23■■□□□ 1.27
TRAPPC3-208ENST00000616074 RFPL2O75678 378 aa23■■□□□ 1.27
TRAPPC3-208ENST00000616074 SEC24BO95487 1268 aa23■■□□□ 1.27
TRAPPC3-208ENST00000616074 SAFBQ15424 915 aaKnown RBP eCLIP23■■□□□ 1.27
TRAPPC3-208ENST00000616074 POTEGQ6S5H5 508 aa23■■□□□ 1.27
TRAPPC3-208ENST00000616074 ATOH1Q92858 354 aaPredicted RBP23■■□□□ 1.27
TRAPPC3-208ENST00000616074 NACC1Q96RE7 527 aa23■■□□□ 1.27
TRAPPC3-208ENST00000616074 POLR3CQ9BUI4 534 aaPredicted RBP23■■□□□ 1.27
TRAPPC3-208ENST00000616074 FZD8Q9H461 694 aa23■■□□□ 1.27
TRAPPC3-208ENST00000616074 CACNG4Q9UBN1 327 aa23■■□□□ 1.27
TRAPPC3-208ENST00000616074 ADAM28Q9UKQ2 775 aa23■■□□□ 1.27
TRAPPC3-208ENST00000616074 TTLL13PA6NNM8 815 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 N4BP1O75113 896 aaKnown RBP22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 SPATA31D3P0C874 917 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 TDGQ13569 410 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 USP41Q3LFD5 358 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 SPATA31D4Q6ZUB0 917 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 PALB2Q86YC2 1186 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 CCDC83Q8IWF9 413 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 ZBTB8OSQ8IWT0 167 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 BSNDQ8WZ55 320 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 IRF2BPLQ9H1B7 796 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 MFSD1Q9H3U5 465 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 KCNK12Q9HB15 430 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 WDR6Q9NNW5 1121 aaKnown RBP22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 DPP7Q9UHL4 492 aa22.99■■□□□ 1.27
TRAPPC3-208ENST00000616074 OR52Z1P0C646 297 aa22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 ZNF174Q15697 407 aa22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 FAM187BQ17R55 369 aa22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 ASTLQ6HA08 431 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 ELMSAN1Q6PJG2 1045 aa22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 GLYCTKQ8IVS8 523 aa22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 ZNF707Q96C28 371 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 C8orf76Q96K31 380 aa22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 PAAF1Q9BRP4 392 aa22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 RHOBTB2Q9BYZ6 727 aa22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 PDZD7Q9H5P4 517 aa22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 DUSP12Q9UNI6 340 aa22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 CLUHO75153 1309 aa22.98■■□□□ 1.27
TRAPPC3-208ENST00000616074 DOCK8Q8NF50 2099 aa22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 TGM5O43548 720 aa22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 RPL17P18621 184 aaKnown RBP22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 RPA1P27694 616 aa22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 CWF19L1Q69YN2 538 aaKnown RBP22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 PADI6Q6TGC4 694 aa22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 CYP26C1Q6V0L0 522 aa22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 ERMNQ8TAM6 284 aa22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 HDAC7Q8WUI4 952 aa22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 RIN2Q8WYP3 895 aaPredicted RBP22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 C2orf40Q9H1Z8 148 aa22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.97■■□□□ 1.273e-6■■□□□ 13.8
TRAPPC3-208ENST00000616074 FNIP2Q9P278 1114 aa22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 LIMCH1Q9UPQ0 1083 aa22.97■■□□□ 1.27
TRAPPC3-208ENST00000616074 N4BP3O15049 544 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms