RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 GRK2P25098 689 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 PEX19P40855 299 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 PEX3P56589 373 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 SLC45A4Q5BKX6 768 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 OR8K1Q8NGG5 319 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 M0QYV0 167 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 JAK3P52333 1124 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 RUNX1T1Q06455 604 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 MTHFSDQ2M296 383 aaKnown RBP13.35□□□□□ -0.27
TCF4-248ENST00000616053 FAM182BQ5T319 152 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 MRFAP1L1Q96HT8 127 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 GLT1D1Q96MS3 346 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 GPN3Q9UHW5 284 aaPredicted RBP13.35□□□□□ -0.27
TCF4-248ENST00000616053 HACL1Q9UJ83 578 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 MEI4A8MW99 385 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 U2AF2P26368 475 aaKnown RBP eCLIP13.35□□□□□ -0.27
TCF4-248ENST00000616053 NLRP12P59046 1061 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 SGCGQ13326 291 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 BFSP2Q13515 415 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 RMDN3Q96TC7 470 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 PTPN1P18031 435 aaKnown RBP13.34□□□□□ -0.27
TCF4-248ENST00000616053 FLT3P36888 993 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 PTPN9P43378 593 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 RGS4P49798 205 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 C2orf40Q9H1Z8 148 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 ZNF302Q9NR11 478 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 CDH2P19022 906 aaPredicted RBP13.34□□□□□ -0.27
TCF4-248ENST00000616053 NCAPHQ15003 741 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 KLHL40Q2TBA0 621 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 GCNT4Q9P109 453 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 WEE1P30291 646 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 IYDQ6PHW0 289 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 CHSY1Q86X52 802 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 APOL5Q9BWW9 433 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 SERPINB13Q9UIV8 391 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 ZNF229Q9UJW7 825 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 DENND4BO75064 1496 aaPredicted RBP13.34□□□□□ -0.27
TCF4-248ENST00000616053 MMP10P09238 476 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 INPP5DQ92835 1189 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 KLHL31Q9H511 634 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 SMYD3Q9H7B4 428 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 PCDHGB3Q9Y5G1 929 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 UBE4BO95155 1302 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 COPEO14579 308 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 DAB1O75553 588 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 CTSEP14091 401 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 KCNH2Q12809 1159 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 PACS1Q6VY07 963 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 MIR1-1HGQ9H1L0 117 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 RERGLQ9H628 205 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 FLT4P35916 1363 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 ZFXP17010 805 aaPredicted RBP13.34□□□□□ -0.27
TCF4-248ENST00000616053 OSCP1Q8WVF1 389 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 SAAL1Q96ER3 474 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 PBLDP30039 288 aaPredicted RBP13.34□□□□□ -0.27
TCF4-248ENST00000616053 CCT5P48643 541 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 ATN1P54259 1190 aaPredicted RBP13.34□□□□□ -0.27
TCF4-248ENST00000616053 MACC1Q6ZN28 852 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 RELL1Q8IUW5 271 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 BCAS4Q8TDM0 211 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 EPC1Q9H2F5 836 aa13.34□□□□□ -0.27
TCF4-248ENST00000616053 SMIM22K7EJ46 135 aa13.33□□□□□ -0.27
TCF4-248ENST00000616053 MTMR1Q13613 665 aa13.33□□□□□ -0.27
TCF4-248ENST00000616053 LRRC8EQ6NSJ5 796 aa13.33□□□□□ -0.27
TCF4-248ENST00000616053 CLCC1Q96S66 551 aa13.33□□□□□ -0.27
TCF4-248ENST00000616053 ARHGAP9Q9BRR9 750 aa13.33□□□□□ -0.27
TCF4-248ENST00000616053 CYP26B1Q9NR63 512 aa13.33□□□□□ -0.27
TCF4-248ENST00000616053 PLA2G4CQ9UP65 541 aa13.33□□□□□ -0.27
TCF4-248ENST00000616053 KITP10721 976 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 SMAD1Q15797 465 aaKnown RBP13.33□□□□□ -0.28
TCF4-248ENST00000616053 USP17L2Q6R6M4 530 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 FAR1Q8WVX9 515 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 OSBPL9Q96SU4 736 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 GAS2L1Q99501 681 aaPredicted RBP13.33□□□□□ -0.28
TCF4-248ENST00000616053 CD274Q9NZQ7 290 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 GOLGA8TH3BQL2 631 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 PSMA4P25789 261 aaKnown RBP13.33□□□□□ -0.28
TCF4-248ENST00000616053 GNGT1P63211 74 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 TNIP3Q96KP6 325 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 PLEKHA5Q9HAU0 1116 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 PCDHB12Q9Y5F1 795 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 USP17L5A8MUK1 530 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.28
TCF4-248ENST00000616053 PAN2Q504Q3 1202 aaKnown RBP13.33□□□□□ -0.28
TCF4-248ENST00000616053 SGO1Q5FBB7 561 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 PRPF18Q99633 342 aaKnown RBP13.33□□□□□ -0.28
TCF4-248ENST00000616053 MDM2Q00987 491 aaPredicted RBP13.33□□□□□ -0.28
TCF4-248ENST00000616053 POLD3Q15054 466 aaPredicted RBP13.33□□□□□ -0.28
TCF4-248ENST00000616053 HORMAD1Q86X24 394 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 ZNF555Q8NEP9 628 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 CEP95Q96GE4 821 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 CELF2O95319 508 aaKnown RBP13.33□□□□□ -0.28
TCF4-248ENST00000616053 HOXA13P31271 388 aaPredicted RBP13.33□□□□□ -0.28
TCF4-248ENST00000616053 ABCE1P61221 599 aaKnown RBP13.33□□□□□ -0.28
TCF4-248ENST00000616053 TRIM65Q6PJ69 517 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 MTSS1LQ765P7 747 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 CEP70Q8NHQ1 597 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 IP6K1Q92551 441 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 ALKBH4Q9NXW9 302 aa13.33□□□□□ -0.28
TCF4-248ENST00000616053 UHRF1BP1LA0JNW5 1464 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms