RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 PPP1R3GB7ZBB8 358 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 SLC4A1P02730 911 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 SCP2P22307 547 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 TYK2P29597 1187 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 SLC1A1P43005 524 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 ANKZF1Q9H8Y5 726 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 NCAPD2Q15021 1401 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 ERBB3P21860 1342 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 PALM3A6NDB9 673 aaPredicted RBP19.96■□□□□ 0.79
SPAST-203ENST00000615843 ASAP2O43150 1006 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 CCND2P30279 289 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 GNA15P30679 374 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 KIAA2013Q8IYS2 634 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 SIX6OS1Q8N1H7 587 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 ACAP3Q96P50 834 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 MTO1Q9Y2Z2 717 aaKnown RBP19.96■□□□□ 0.79
SPAST-203ENST00000615843 TAF6LQ9Y6J9 622 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 STAT3P40763 770 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 LRRC8EQ6NSJ5 796 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 SRBD1Q8N5C6 995 aaKnown RBP19.96■□□□□ 0.79
SPAST-203ENST00000615843 MOV10L1Q9BXT6 1211 aaKnown RBP19.96■□□□□ 0.79
SPAST-203ENST00000615843 STK33Q9BYT3 514 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 SNAP23O00161 211 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 SLC16A4O15374 487 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 KCNA4P22459 653 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 KYNUQ16719 465 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 FAM98CQ17RN3 349 aaKnown RBP19.96■□□□□ 0.79
SPAST-203ENST00000615843 SCG3Q8WXD2 468 aaKnown RBP19.96■□□□□ 0.79
SPAST-203ENST00000615843 AKT3Q9Y243 479 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 MAGEA13PA6NCF6 341 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 SEC24DO94855 1032 aaPredicted RBP19.96■□□□□ 0.79
SPAST-203ENST00000615843 PAMP19021 973 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 USP11P51784 963 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 IGDCC4Q8TDY8 1250 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 BSDC1Q9NW68 430 aaPredicted RBP19.96■□□□□ 0.79
SPAST-203ENST00000615843 DONSONQ9NYP3 566 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 ZNF229Q9UJW7 825 aa19.96■□□□□ 0.79
SPAST-203ENST00000615843 PMLP29590 882 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 SCARF1Q14162 830 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 FAM213AQ9BRX8 229 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 ARHGEF9O43307 516 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 TSTA3Q13630 321 aaPredicted RBP19.95■□□□□ 0.78
SPAST-203ENST00000615843 NAIF1Q69YI7 327 aaPredicted RBP19.95■□□□□ 0.78
SPAST-203ENST00000615843 TRIM72Q6ZMU5 477 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 PACS2Q86VP3 889 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 COL23A1Q86Y22 540 aaPredicted RBP19.95■□□□□ 0.78
SPAST-203ENST00000615843 KCNK16Q96T55 309 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 RPF1Q9H9Y2 349 aaKnown RBP19.95■□□□□ 0.78
SPAST-203ENST00000615843 SLC16A3O15427 465 aaKnown RBP19.95■□□□□ 0.78
SPAST-203ENST00000615843 MAPRE2Q15555 327 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 ROBO2Q9HCK4 1378 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 POLR1AO95602 1720 aaPredicted RBP19.95■□□□□ 0.78
SPAST-203ENST00000615843 PBRM1Q86U86 1689 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 ASCC2Q9H1I8 757 aaPredicted RBP19.95■□□□□ 0.78
SPAST-203ENST00000615843 PPCSQ9HAB8 311 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 PI4KBQ9UBF8 816 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 PNPLA6Q8IY17 1366 aa19.95■□□□□ 0.78
SPAST-203ENST00000615843 IL10P22301 178 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 AARSP49588 968 aaKnown RBP eCLIP19.94■□□□□ 0.78
SPAST-203ENST00000615843 PAPOLAP51003 745 aaKnown RBP19.94■□□□□ 0.78
SPAST-203ENST00000615843 SUSD4Q5VX71 490 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 ENOSF1Q7L5Y1 443 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 AGR3Q8TD06 166 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 TMBIM4Q9HC24 238 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 DDX28Q9NUL7 540 aaKnown RBP19.94■□□□□ 0.78
SPAST-203ENST00000615843 SUCLA2Q9P2R7 463 aaPredicted RBP19.94■□□□□ 0.78
SPAST-203ENST00000615843 CYP26A1O43174 497 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 MAP4P27816 1152 aaKnown RBP19.94■□□□□ 0.78
SPAST-203ENST00000615843 PAPD7Q5XG87 772 aaKnown RBP19.94■□□□□ 0.78
SPAST-203ENST00000615843 NCAPG2Q86XI2 1143 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 NSL1Q96IY1 281 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 UVRAGQ9P2Y5 699 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 MARCOQ9UEW3 520 aaPredicted RBP19.94■□□□□ 0.78
SPAST-203ENST00000615843 ARHGAP26Q9UNA1 814 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 NEU2Q9Y3R4 380 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 EIF2AK2P19525 551 aaKnown RBP19.94■□□□□ 0.78
SPAST-203ENST00000615843 TBXAS1P24557 533 aaPredicted RBP19.94■□□□□ 0.78
SPAST-203ENST00000615843 BCAR1P56945 870 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 PDIA5Q14554 519 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 EXOC8Q8IYI6 725 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 TARSP26639 723 aaKnown RBP19.94■□□□□ 0.78
SPAST-203ENST00000615843 PRDX5P30044 214 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 SLC44A5Q8NCS7 719 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 ERGIC2Q96RQ1 377 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 ZFATQ9P243 1243 aa19.94■□□□□ 0.78
SPAST-203ENST00000615843 FNDC3AQ9Y2H6 1198 aaKnown RBP19.94■□□□□ 0.78
SPAST-203ENST00000615843 KRT4P19013 534 aa19.93■□□□□ 0.78
SPAST-203ENST00000615843 TRPC1P48995 793 aa19.93■□□□□ 0.78
SPAST-203ENST00000615843 DAB2P98082 770 aa19.93■□□□□ 0.78
SPAST-203ENST00000615843 STX3Q13277 289 aa19.93■□□□□ 0.78
SPAST-203ENST00000615843 KIRREL3Q8IZU9 778 aa19.93■□□□□ 0.78
SPAST-203ENST00000615843 LRRN4CLQ8ND94 238 aa19.93■□□□□ 0.78
SPAST-203ENST00000615843 DCAF4Q8WV16 495 aa19.93■□□□□ 0.78
SPAST-203ENST00000615843 CCDC134Q9H6E4 229 aa19.93■□□□□ 0.78
SPAST-203ENST00000615843 PDHBP11177 359 aa19.93■□□□□ 0.78
SPAST-203ENST00000615843 ARL13BQ3SXY8 428 aa19.93■□□□□ 0.78
SPAST-203ENST00000615843 DCAF15Q66K64 600 aa19.93■□□□□ 0.78
SPAST-203ENST00000615843 PDXDC2PQ6P474 469 aa19.93■□□□□ 0.78
SPAST-203ENST00000615843 TMED10P49755 219 aaKnown RBP19.93■□□□□ 0.78
SPAST-203ENST00000615843 CEP55Q53EZ4 464 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms