RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ZMYND8Q9ULU4 1186 aaPredicted RBP16.06■□□□□ 0.16
CD48-203ENST00000613788 SMTNL1A8MU46 457 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 ABLIM1O14639 778 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 CETN3O15182 167 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 SKIP12755 728 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 NR2F2P24468 414 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 ADAM9Q13443 819 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 KYAT1Q16773 422 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 CSGALNACT2Q8N6G5 542 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 XXYLT1Q8NBI6 393 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 CBWD1Q9BRT8 395 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 CDT1Q9H211 546 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 PCIF1Q9H4Z3 704 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 RGS18Q9NS28 235 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 C1orf112Q9NSG2 853 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 HSPBP1Q9NZL4 362 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 SIP14410 1827 aa16.05■□□□□ 0.16
CD48-203ENST00000613788 OGTO15294 1046 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 EXOC3O60645 756 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 NPTXRO95502 500 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 ACTN1P12814 892 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 RAB27AP51159 221 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 CYP2J2P51589 502 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 SPATA1Q5VX52 437 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 SLC24A5Q71RS6 500 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 HACE1Q8IYU2 909 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 DUSP9Q99956 384 aaKnown RBP16.04■□□□□ 0.16
CD48-203ENST00000613788 HAPLN2Q9GZV7 340 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 TSPYL2Q9H2G4 693 aaPredicted RBP16.04■□□□□ 0.16
CD48-203ENST00000613788 FAM105AQ9NUU6 356 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 DMAC2Q9NW81 257 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 FRMD4BQ9Y2L6 1034 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 ALPK3Q96L96 1907 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 A0A0U1RQF3 1178 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 ABHD14A-ACY1A0A1B0GW23 586 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 BECN2A8MW95 431 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 ENPP3O14638 875 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 IKBKBO14920 756 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 EXTL3O43909 919 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 MGEA5O60502 916 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 EFCAB14O75071 495 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 HARSP12081 509 aaKnown RBP16.04■□□□□ 0.16
CD48-203ENST00000613788 MYL5Q02045 173 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 UBXN11Q5T124 520 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 THNSL1Q8IYQ7 743 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 GPD1LQ8N335 351 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 NOC3LQ8WTT2 800 aaKnown RBP16.04■□□□□ 0.16
CD48-203ENST00000613788 CEP63Q96MT8 703 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 MED15Q96RN5 788 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 SRRTQ9BXP5 876 aaKnown RBP16.04■□□□□ 0.16
CD48-203ENST00000613788 EIF2AQ9BY44 585 aaKnown RBP16.04■□□□□ 0.16
CD48-203ENST00000613788 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
CD48-203ENST00000613788 PCDHB2Q9Y5E7 798 aa16.04■□□□□ 0.16
CD48-203ENST00000613788 TANC1Q9C0D5 1861 aa16.03■□□□□ 0.16
CD48-203ENST00000613788 ZNF623O75123 536 aa16.03■□□□□ 0.16
CD48-203ENST00000613788 FGBP02675 491 aa16.03■□□□□ 0.16
CD48-203ENST00000613788 CLTAP09496 248 aa16.03■□□□□ 0.16
CD48-203ENST00000613788 GRM5P41594 1212 aa16.03■□□□□ 0.16
CD48-203ENST00000613788 RGS19P49795 217 aa16.03■□□□□ 0.16
CD48-203ENST00000613788 CEP135Q66GS9 1140 aa16.03■□□□□ 0.16
CD48-203ENST00000613788 FILIP1Q7Z7B0 1213 aa16.03■□□□□ 0.16
CD48-203ENST00000613788 RTN4RL1Q86UN2 441 aaPredicted RBP16.03■□□□□ 0.16
CD48-203ENST00000613788 ZC3H3Q8IXZ2 948 aaKnown RBP16.03■□□□□ 0.16
CD48-203ENST00000613788 FAM200AQ8TCP9 573 aa16.03■□□□□ 0.16
CD48-203ENST00000613788 VWCEQ96DN2 955 aa16.03■□□□□ 0.16
CD48-203ENST00000613788 SAAL1Q96ER3 474 aa16.03■□□□□ 0.16
CD48-203ENST00000613788 FAM213AQ9BRX8 229 aa16.03■□□□□ 0.16
CD48-203ENST00000613788 CCDC94Q9BW85 323 aaPredicted RBP16.03■□□□□ 0.16
CD48-203ENST00000613788 ZNF233A6NK53 670 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 C9IYK1 514 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 BAIAP3O94812 1187 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 GNA14O95837 355 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 EOMESO95936 686 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 ACRP10323 421 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 PSMC2P35998 433 aaKnown RBP16.02■□□□□ 0.15
CD48-203ENST00000613788 FAM189BP81408 668 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 POU5F1Q01860 360 aaKnown RBP16.02■□□□□ 0.15
CD48-203ENST00000613788 AOPEPQ8N6M6 819 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 RDH13Q8NBN7 331 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 PGBD4Q96DM1 585 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 FBXL18Q96ME1 805 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 ACAP3Q96P50 834 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 MKNK1Q9BUB5 465 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 CBX8Q9HC52 389 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 NFE2L3Q9Y4A8 694 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 IPPQ9Y573 584 aa16.02■□□□□ 0.15
CD48-203ENST00000613788 GOLGA8IPA6NC78 632 aa16.01■□□□□ 0.15
CD48-203ENST00000613788 GOLGA8JA6NMD2 632 aa16.01■□□□□ 0.15
CD48-203ENST00000613788 MAPK13O15264 365 aa16.01■□□□□ 0.15
CD48-203ENST00000613788 STAG3L1P0CL83 205 aa16.01■□□□□ 0.15
CD48-203ENST00000613788 EPB41P11171 864 aaKnown RBP16.01■□□□□ 0.15
CD48-203ENST00000613788 ACOT2P49753 483 aa16.01■□□□□ 0.15
CD48-203ENST00000613788 YARSP54577 528 aaKnown RBP16.01■□□□□ 0.15
CD48-203ENST00000613788 OSTNP61366 133 aa16.01■□□□□ 0.15
CD48-203ENST00000613788 TPM4P67936 248 aa16.01■□□□□ 0.15
CD48-203ENST00000613788 IQCB1Q15051 598 aa16.01■□□□□ 0.15
CD48-203ENST00000613788 SNRNP35Q16560 246 aaKnown RBP16.01■□□□□ 0.15
CD48-203ENST00000613788 TCTN1Q2MV58 587 aa16.01■□□□□ 0.15
CD48-203ENST00000613788 PSRC1Q6PGN9 363 aaPredicted RBP16.01■□□□□ 0.15
CD48-203ENST00000613788 LRRC55Q6ZSA7 311 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms