RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 LINC00271P0C7V0 271 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 PRR29P0C7W0 189 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 MYBP10242 640 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 AKAP5P24588 427 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 CASP5P51878 434 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 EHHADHQ08426 723 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 GRIN2CQ14957 1233 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 ZNF568Q3ZCX4 644 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 KANK3Q6NY19 840 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 GLB1LQ6UWU2 654 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 MPZL3Q6UWV2 235 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 LRRC55Q6ZSA7 311 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 APBB1IPQ7Z5R6 666 aaPredicted RBP18.21■□□□□ 0.51
IRF1-211ENST00000613424 ZBTB33Q86T24 672 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 HACE1Q8IYU2 909 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 CLP1Q92989 425 aaKnown RBP18.21■□□□□ 0.51
IRF1-211ENST00000613424 CDT1Q9H211 546 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 SNTG2Q9NY99 539 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 MTUS1Q9ULD2 1270 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 GIT1Q9Y2X7 761 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 PIGRP01833 764 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 LIG4P49917 911 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 AFF1P51825 1210 aaKnown RBP18.2■□□□□ 0.5
IRF1-211ENST00000613424 UBE2HP62256 183 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 KCNA1Q09470 495 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 EPC2Q52LR7 807 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 NOMO2Q5JPE7 1267 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 L1TD1Q5T7N2 865 aaKnown RBP18.2■□□□□ 0.5
IRF1-211ENST00000613424 TMEM192Q8IY95 271 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 GLIS3Q8NEA6 775 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 ARNTL2Q8WYA1 636 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 HVCN1Q96D96 273 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 SAMD11Q96NU1 681 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 ACCSQ96QU6 501 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 HAPLN2Q9GZV7 340 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 CWH43Q9H720 699 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 HCSTQ9UBK5 93 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 PARP2Q9UGN5 583 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 INPP5FQ9Y2H2 1132 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 CHD7Q9P2D1 2997 aa18.2■□□□□ 0.5
IRF1-211ENST00000613424 EPOPA6NHQ4 379 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 ANKRD63C9JTQ0 380 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 HNRNPDLO14979 420 aaKnown RBP18.19■□□□□ 0.5
IRF1-211ENST00000613424 CLDN3O15551 220 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 PRPF6O94906 941 aaKnown RBP18.19■□□□□ 0.5
IRF1-211ENST00000613424 MCF2P10911 925 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 BMPR1AP36894 532 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 MATR3P43243 847 aaKnown RBP eCLIP18.19■□□□□ 0.5
IRF1-211ENST00000613424 MCL1Q07820 350 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 DPYDQ12882 1025 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 ALCAMQ13740 583 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 KMT5BQ4FZB7 885 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 FAM26FQ5R3K3 315 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 SPOUT1Q5T280 376 aaKnown RBP18.19■□□□□ 0.5
IRF1-211ENST00000613424 SLC39A4Q6P5W5 647 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 RSPH1Q8WYR4 309 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 CCDC34Q96HJ3 373 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 TIGD1Q96MW7 591 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 GAD1Q99259 594 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 IKZF4Q9H2S9 585 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 PRDM12Q9H4Q4 367 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 MIOSQ9NXC5 875 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 MTMR10Q9NXD2 777 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 KLK14Q9P0G3 267 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 ANKFY1Q9P2R3 1169 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 GDAQ9Y2T3 454 aa18.19■□□□□ 0.5
IRF1-211ENST00000613424 ARL5CA6NH57 179 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 RFXAPO00287 272 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 RPN1P04843 607 aaKnown RBP18.18■□□□□ 0.5
IRF1-211ENST00000613424 HARSP12081 509 aaKnown RBP18.18■□□□□ 0.5
IRF1-211ENST00000613424 MLH1P40692 756 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 NOLC1Q14978 699 aaKnown RBP eCLIP18.18■□□□□ 0.5
IRF1-211ENST00000613424 POSTNQ15063 836 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 THNSL1Q8IYQ7 743 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 LRRC43Q8N309 656 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 CEP120Q8N960 986 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 URGCPQ8TCY9 931 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 ZFP42Q96MM3 310 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 MRPL9Q9BYD2 267 aaKnown RBP18.18■□□□□ 0.5
IRF1-211ENST00000613424 SLC39A2Q9NP94 309 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 EXOC1Q9NV70 894 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 TBC1D13Q9NVG8 400 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 KANSL3Q9P2N6 904 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 EXOC7Q9UPT5 735 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 RWDD3Q9Y3V2 267 aa18.18■□□□□ 0.5
IRF1-211ENST00000613424 TISP43B9A030 160 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 INPPL1O15357 1258 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 RECQL4O94761 1208 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 POMCP01189 267 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 CTNNB1P35222 781 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 GRM5P41594 1212 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 OSTNP61366 133 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 PSMD2Q13200 908 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 STXBP4Q6ZWJ1 553 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 EPM2AIP1Q7L775 607 aaPredicted RBP18.17■□□□□ 0.5
IRF1-211ENST00000613424 SYCP3Q8IZU3 236 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 GSTCDQ8NEC7 633 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 FBXO22Q8NEZ5 403 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 ZNF507Q8TCN5 953 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 GUCD1Q96NT3 240 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms