RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 B3GALT6Q96L58 329 aa18.61■□□□□ 0.57
TVP23A-210ENST00000612195 TRIM6Q9C030 488 aaPredicted RBP18.61■□□□□ 0.57
TVP23A-210ENST00000612195 NXF3Q9H4D5 531 aaKnown RBP18.61■□□□□ 0.57
TVP23A-210ENST00000612195 ANKEF1Q9NU02 776 aa18.61■□□□□ 0.57
TVP23A-210ENST00000612195 DUSP12Q9UNI6 340 aa18.61■□□□□ 0.57
TVP23A-210ENST00000612195 A0A087WWV3 80 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 NR1I2O75469 434 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 DGAT1O75907 488 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 GLRA2P23416 452 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 AKAP5P24588 427 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 DSG1Q02413 1049 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 CALCRLQ16602 461 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 CDR2LQ86X02 465 aaPredicted RBP18.6■□□□□ 0.57
TVP23A-210ENST00000612195 PALB2Q86YC2 1186 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 NECAB1Q8N987 351 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 GSTCDQ8NEC7 633 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 RSAD2Q8WXG1 361 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 WASF1Q92558 559 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 COLEC11Q9BWP8 271 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 TTC12Q9H892 705 aaPredicted RBP18.6■□□□□ 0.57
TVP23A-210ENST00000612195 WDR6Q9NNW5 1121 aaKnown RBP18.6■□□□□ 0.57
TVP23A-210ENST00000612195 CHST7Q9NS84 486 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 IGSF9Q9P2J2 1179 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 DPP7Q9UHL4 492 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 FBXL21Q9UKT6 434 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 GIT1Q9Y2X7 761 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 ZNF292O60281 2723 aa18.6■□□□□ 0.57
TVP23A-210ENST00000612195 B4GALT5O43286 388 aa18.59■□□□□ 0.57
TVP23A-210ENST00000612195 NARSO43776 548 aaKnown RBP18.59■□□□□ 0.57
TVP23A-210ENST00000612195 AOC1P19801 751 aa18.59■□□□□ 0.57
TVP23A-210ENST00000612195 GBP2P32456 591 aaPredicted RBP18.59■□□□□ 0.57
TVP23A-210ENST00000612195 ELMSAN1Q6PJG2 1045 aa18.59■□□□□ 0.57
TVP23A-210ENST00000612195 CYP26C1Q6V0L0 522 aa18.59■□□□□ 0.57
TVP23A-210ENST00000612195 HACE1Q8IYU2 909 aa18.59■□□□□ 0.57
TVP23A-210ENST00000612195 SIX5Q8N196 739 aa18.59■□□□□ 0.57
TVP23A-210ENST00000612195 RABGGTAQ92696 567 aa18.59■□□□□ 0.57
TVP23A-210ENST00000612195 CCDC43Q96MW1 224 aaKnown RBP18.59■□□□□ 0.57
TVP23A-210ENST00000612195 NFKBIZQ9BYH8 718 aa18.59■□□□□ 0.57
TVP23A-210ENST00000612195 RHOBTB2Q9BYZ6 727 aa18.59■□□□□ 0.57
TVP23A-210ENST00000612195 GPR62Q9BZJ7 368 aa18.59■□□□□ 0.57
TVP23A-210ENST00000612195 BRMS1Q9HCU9 246 aa18.59■□□□□ 0.57
TVP23A-210ENST00000612195 MTCL1Q9Y4B5 1905 aaKnown RBP18.59■□□□□ 0.57
TVP23A-210ENST00000612195 CLUHO75153 1309 aa18.58■□□□□ 0.57
TVP23A-210ENST00000612195 PRR23AA6NEV1 266 aa18.58■□□□□ 0.56
TVP23A-210ENST00000612195 WNT7AO00755 349 aa18.58■□□□□ 0.56
TVP23A-210ENST00000612195 NPTXRO95502 500 aa18.58■□□□□ 0.56
TVP23A-210ENST00000612195 TXKP42681 527 aa18.58■□□□□ 0.56
TVP23A-210ENST00000612195 RARRES1P49788 294 aa18.58■□□□□ 0.56
TVP23A-210ENST00000612195 FRMD5Q7Z6J6 570 aa18.58■□□□□ 0.56
TVP23A-210ENST00000612195 PIGOQ8TEQ8 1089 aa18.58■□□□□ 0.56
TVP23A-210ENST00000612195 HDAC7Q8WUI4 952 aa18.58■□□□□ 0.56
TVP23A-210ENST00000612195 SMG7Q92540 1137 aaKnown RBP18.58■□□□□ 0.56
TVP23A-210ENST00000612195 STAMQ92783 540 aa18.58■□□□□ 0.56
TVP23A-210ENST00000612195 ZNF707Q96C28 371 aaPredicted RBP18.58■□□□□ 0.56
TVP23A-210ENST00000612195 MYADMQ96S97 322 aa18.58■□□□□ 0.56
TVP23A-210ENST00000612195 KLK14Q9P0G3 267 aa18.58■□□□□ 0.56
TVP23A-210ENST00000612195 A0A1B0GUA9 196 aa18.57■□□□□ 0.56
TVP23A-210ENST00000612195 BTBD18B2RXH4 712 aa18.57■□□□□ 0.56
TVP23A-210ENST00000612195 TGM5O43548 720 aa18.57■□□□□ 0.56
TVP23A-210ENST00000612195 USP41Q3LFD5 358 aa18.57■□□□□ 0.56
TVP23A-210ENST00000612195 FUT10Q6P4F1 479 aa18.57■□□□□ 0.56
TVP23A-210ENST00000612195 SLC27A1Q6PCB7 646 aa18.57■□□□□ 0.56
TVP23A-210ENST00000612195 SNX27Q96L92 541 aa18.57■□□□□ 0.56
TVP23A-210ENST00000612195 NT5C3AQ9H0P0 336 aa18.57■□□□□ 0.56
TVP23A-210ENST00000612195 POLR3FQ9H1D9 316 aaPredicted RBP18.57■□□□□ 0.56
TVP23A-210ENST00000612195 EPS15L1Q9UBC2 864 aa18.57■□□□□ 0.56
TVP23A-210ENST00000612195 PARP2Q9UGN5 583 aa18.57■□□□□ 0.56
TVP23A-210ENST00000612195 ADAM28Q9UKQ2 775 aa18.57■□□□□ 0.56
TVP23A-210ENST00000612195 DOCK8Q8NF50 2099 aa18.57■□□□□ 0.56
TVP23A-210ENST00000612195 NEMFO60524 1076 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 PAPLNO95428 1278 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 CFHP08603 1231 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 RPL17P18621 184 aaKnown RBP18.56■□□□□ 0.56
TVP23A-210ENST00000612195 ANKRD1Q15327 319 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 ME3Q16798 604 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 LILRA6Q6PI73 481 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 MAEAQ7L5Y9 396 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 GLYCTKQ8IVS8 523 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 CCDC105Q8IYK2 499 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 SLC44A3Q8N4M1 653 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 RIN2Q8WYP3 895 aaPredicted RBP18.56■□□□□ 0.56
TVP23A-210ENST00000612195 MTMR9Q96QG7 549 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 RTP3Q9BQQ7 232 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 PLEKHA4Q9H4M7 779 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 PIDD1Q9HB75 910 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 GPRC5CQ9NQ84 441 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.56■□□□□ 0.56
TVP23A-210ENST00000612195 CACNG4Q9UBN1 327 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 GVINP1Q7Z2Y8 2422 aa18.56■□□□□ 0.56
TVP23A-210ENST00000612195 LRRIQ4A6NIV6 560 aa18.55■□□□□ 0.56
TVP23A-210ENST00000612195 USO1O60763 962 aaKnown RBP18.55■□□□□ 0.56
TVP23A-210ENST00000612195 TADA2AO75478 443 aa18.55■□□□□ 0.56
TVP23A-210ENST00000612195 LARGE1O95461 756 aa18.55■□□□□ 0.56
TVP23A-210ENST00000612195 C1RP00736 705 aa18.55■□□□□ 0.56
TVP23A-210ENST00000612195 XRCC6P12956 609 aaKnown RBP eCLIP18.55■□□□□ 0.56
TVP23A-210ENST00000612195 FOSBP53539 338 aa18.55■□□□□ 0.56
TVP23A-210ENST00000612195 ANAPC15P60006 121 aa18.55■□□□□ 0.56
TVP23A-210ENST00000612195 GRIK3Q13003 919 aa18.55■□□□□ 0.56
TVP23A-210ENST00000612195 POTEGQ6S5H5 508 aa18.55■□□□□ 0.56
TVP23A-210ENST00000612195 DIS3L2Q8IYB7 885 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms