RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 FAM189A1O60320 539 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 NR2F2P24468 414 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 AXLP30530 894 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 PPP1R2P41236 205 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 NCBP1Q09161 790 aaKnown RBP13.17□□□□□ -0.3
CLK4-215ENST00000611733 PCBP1Q15365 356 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLK4-215ENST00000611733 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
CLK4-215ENST00000611733 LRRC55Q6ZSA7 311 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 IRF2BP1Q8IU81 584 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 ENOX1Q8TC92 643 aaKnown RBP13.17□□□□□ -0.3
CLK4-215ENST00000611733 MSTO1Q9BUK6 570 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 RBSNQ9H1K0 784 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 HSD3B7Q9H2F3 369 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 RNF19AQ9NV58 838 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 ENPP3O14638 875 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 N4BP3O15049 544 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 MEFVO15553 781 aaPredicted RBP13.17□□□□□ -0.3
CLK4-215ENST00000611733 WNT7BP56706 349 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 LRRC63Q05C16 580 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 EDRF1Q3B7T1 1238 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 SLC27A1Q6PCB7 646 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 CBWD2Q8IUF1 395 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 TMEM199Q8N511 208 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 CSGALNACT2Q8N6G5 542 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 SMG8Q8ND04 991 aaKnown RBP13.17□□□□□ -0.3
CLK4-215ENST00000611733 SEPT8Q92599 483 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 TSG101Q99816 390 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 FAM213AQ9BRX8 229 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 NXF3Q9H4D5 531 aaKnown RBP13.17□□□□□ -0.3
CLK4-215ENST00000611733 CHST12Q9NRB3 414 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 FANCLQ9NW38 375 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 AGO2Q9UKV8 859 aaKnown RBP13.17□□□□□ -0.3
CLK4-215ENST00000611733 NFE2L3Q9Y4A8 694 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 BICDL2A1A5D9 508 aa13.16□□□□□ -0.3
CLK4-215ENST00000611733 AKAP3O75969 853 aa13.16□□□□□ -0.3
CLK4-215ENST00000611733 ZSCAN20P17040 1043 aaPredicted RBP13.16□□□□□ -0.3
CLK4-215ENST00000611733 GARTP22102 1010 aa13.16□□□□□ -0.3
CLK4-215ENST00000611733 NOLC1Q14978 699 aaKnown RBP eCLIP13.16□□□□□ -0.3
CLK4-215ENST00000611733 CT47A1Q5JQC4 288 aaPredicted RBP13.16□□□□□ -0.3
CLK4-215ENST00000611733 SPATA1Q5VX52 437 aa13.16□□□□□ -0.3
CLK4-215ENST00000611733 CEP135Q66GS9 1140 aa13.16□□□□□ -0.3
CLK4-215ENST00000611733 SLFN12LQ6IEE8 588 aa13.16□□□□□ -0.3
CLK4-215ENST00000611733 C12orf56Q8IXR9 622 aa13.16□□□□□ -0.3
CLK4-215ENST00000611733 ZC3H3Q8IXZ2 948 aaKnown RBP13.16□□□□□ -0.3
CLK4-215ENST00000611733 LPPQ93052 612 aa13.16□□□□□ -0.3
CLK4-215ENST00000611733 BPIFA3Q9BQP9 254 aa13.16□□□□□ -0.3
CLK4-215ENST00000611733 SNTG2Q9NY99 539 aa13.16□□□□□ -0.3
CLK4-215ENST00000611733 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.15□□□□□ -0.3
CLK4-215ENST00000611733 TULP1O00294 542 aaPredicted RBP13.15□□□□□ -0.3
CLK4-215ENST00000611733 ADRB2P07550 413 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 AKAP5P24588 427 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 FKBP3Q00688 224 aaKnown RBP13.15□□□□□ -0.3
CLK4-215ENST00000611733 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLK4-215ENST00000611733 SLC9A9Q8IVB4 645 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 FAM84AQ96KN4 292 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 APOL6Q9BWW8 343 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 TANC1Q9C0D5 1861 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 NAT10Q9H0A0 1025 aaKnown RBP13.15□□□□□ -0.3
CLK4-215ENST00000611733 RGS18Q9NS28 235 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 FAM105AQ9NUU6 356 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 IPPQ9Y573 584 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 PCDHB2Q9Y5E7 798 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 OGTO15294 1046 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 EXOC3O60645 756 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 PARNO95453 639 aaKnown RBP13.15□□□□□ -0.3
CLK4-215ENST00000611733 STAG3L1P0CL83 205 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 MCF2P10911 925 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 ATF7P17544 494 aaPredicted RBP13.15□□□□□ -0.3
CLK4-215ENST00000611733 RFC2P35250 354 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 SNRPFP62306 86 aaKnown RBP13.15□□□□□ -0.3
CLK4-215ENST00000611733 MYL5Q02045 173 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 NFIL3Q16649 462 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 TMEM130Q8N3G9 435 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 XXYLT1Q8NBI6 393 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 GOLGA5Q8TBA6 731 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 PLEKHO2Q8TD55 490 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 ADPGKQ9BRR6 497 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 TSPYL2Q9H2G4 693 aaPredicted RBP13.15□□□□□ -0.3
CLK4-215ENST00000611733 IL23AQ9NPF7 189 aa13.15□□□□□ -0.3
CLK4-215ENST00000611733 CGNQ9P2M7 1197 aaKnown RBP13.15□□□□□ -0.3
CLK4-215ENST00000611733 C9IYK1 514 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 CETN3O15182 167 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 AFF1P51825 1210 aaKnown RBP13.14□□□□□ -0.31
CLK4-215ENST00000611733 FPGSQ05932 587 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 TPD52L1Q16890 204 aaPredicted RBP13.14□□□□□ -0.31
CLK4-215ENST00000611733 CNKSR3Q6P9H4 555 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 ZNF365Q70YC5 407 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 OTOP2Q7RTS6 562 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 TMCO2Q7Z6W1 182 aaPredicted RBP13.14□□□□□ -0.31
CLK4-215ENST00000611733 CREBRFQ8IUR6 639 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 GPD1LQ8N335 351 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 RNF169Q8NCN4 708 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 FBXL18Q96ME1 805 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 TRIM6Q9C030 488 aaPredicted RBP13.14□□□□□ -0.31
CLK4-215ENST00000611733 KLK14Q9P0G3 267 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 CPSF3Q9UKF6 684 aaKnown RBP13.14□□□□□ -0.31
CLK4-215ENST00000611733 A0A0U1RQF3 1178 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 EXTL3O43909 919 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 ATP1A3P13637 1013 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms