RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 TAS2R14Q9NYV8 317 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 TMOD4Q9NZQ9 345 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 CTTNBP2NLQ9P2B4 639 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 UVRAGQ9P2Y5 699 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 COG5Q9UP83 839 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 BRCA1P38398 1863 aaKnown RBP11.25□□□□□ -0.61
PABPC1-224ENST00000610907 RLFQ13129 1914 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 TMEM150BA6NC51 233 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ZNF233A6NK53 670 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 HMGB1P1B2RPK0 211 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ZNF862O60290 1169 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 RGS20O76081 388 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 CYP1A2P05177 515 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 CHRNB2P17787 502 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ECHS1P30084 290 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 GBP1P32455 592 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 CLDN10P78369 228 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 CDR2Q01850 454 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 MAP2K1Q02750 393 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-224ENST00000610907 PRPF4BQ13523 1007 aaKnown RBP11.24□□□□□ -0.61
PABPC1-224ENST00000610907 TMEM132BQ14DG7 1078 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 SMYD5Q6GMV2 418 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 SWSAP1Q6NVH7 229 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 PALB2Q86YC2 1186 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 PPM1KQ8N3J5 372 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 CHST13Q8NET6 341 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 HELQQ8TDG4 1101 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 PIK3R5Q8WYR1 880 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 POMGNT1Q8WZA1 660 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 KREMEN1Q96MU8 473 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 DDX47Q9H0S4 455 aaKnown RBP11.24□□□□□ -0.61
PABPC1-224ENST00000610907 CYP26B1Q9NR63 512 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ARHGAP28Q9P2N2 729 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 GTF3C4Q9UKN8 822 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 SCAF8Q9UPN6 1271 aaKnown RBP11.24□□□□□ -0.61
PABPC1-224ENST00000610907 CD2APQ9Y5K6 639 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 PHIPQ8WWQ0 1821 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 GOLGA8IPA6NC78 632 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 GOLGA6L10A6NI86 522 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 GOLGA8JA6NMD2 632 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ERLIN2O94905 339 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ATG7O95352 703 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 SGPL1O95470 568 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 SUPT20HL2P0C7V6 817 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ITGA4P13612 1032 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 USP8P40818 1118 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 PDE6CP51160 858 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 IRAK1P51617 712 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 GUCY2FP51841 1108 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 HMGCS2P54868 508 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 BPIFB4P59827 614 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ACTR2P61160 394 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 SUPT20HL1Q3ZLR7 823 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 TTMPQ5BVD1 217 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 SH3D19Q5HYK7 790 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 RUFY4Q6ZNE9 571 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 NOP9Q86U38 636 aaKnown RBP11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ZNF677Q86XU0 584 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ZSWIM2Q8NEG5 633 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 SEMA4DQ92854 862 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ZKSCAN4Q969J2 545 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ARL8AQ96BM9 186 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 CCDC127Q96BQ5 260 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 KLRG1Q96E93 195 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 WNK4Q96J92 1243 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 ZSWIM1Q9BR11 485 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 SH2D3AQ9BRG2 576 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 MTFR1LQ9H019 292 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 AMACRQ9UHK6 382 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 GJA3Q9Y6H8 435 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 STYXL1Q9Y6J8 313 aa11.24□□□□□ -0.61
PABPC1-224ENST00000610907 SRRM3A6NNA2 597 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-224ENST00000610907 PODXLO00592 558 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 HNRNPDLO14979 420 aaKnown RBP11.23□□□□□ -0.61
PABPC1-224ENST00000610907 CYP26A1O43174 497 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 EXTL3O43909 919 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 LDHAP00338 332 aaKnown RBP11.23□□□□□ -0.61
PABPC1-224ENST00000610907 PIGRP01833 764 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 CYP11B1P15538 503 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 CTNNA2P26232 953 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 CHRNA3P32297 505 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 FMO1Q01740 532 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 PRKCEQ02156 737 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 STXBP2Q15833 593 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 DCAF12L1Q5VU92 463 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 SLFN12LQ6IEE8 588 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 ACAD10Q6JQN1 1059 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 SLC39A4Q6P5W5 647 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 KDM7AQ6ZMT4 941 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 C15orf39Q6ZRI6 1047 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 SV2AQ7L0J3 742 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 ARFGAP2Q8N6H7 521 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 BSNDQ8WZ55 320 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 SAAL1Q96ER3 474 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 TRIM11Q96F44 468 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 ATP6V1G3Q96LB4 118 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 PCDHB18PQ96TA0 734 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 ERP44Q9BS26 406 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 PLVAPQ9BX97 442 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 A1CFQ9NQ94 594 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms