RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 MYBP10242 640 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 RPA1P27694 616 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 GNL2Q13823 731 aaKnown RBP17.72■□□□□ 0.43
SGMS1-209ENST00000609445 ECM1Q16610 540 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 C8orf34Q49A92 452 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 IER5LQ5T953 404 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 CDCA2Q69YH5 1023 aaPredicted RBP17.72■□□□□ 0.43
SGMS1-209ENST00000609445 PADI6Q6TGC4 694 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 PPP4R3CPQ6ZMV5 832 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 ALYREFQ86V81 257 aaKnown RBP17.72■□□□□ 0.43
SGMS1-209ENST00000609445 NOSTRINQ8IVI9 506 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 C4orf32Q8N8J7 132 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 KREMEN2Q8NCW0 462 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 ZSCAN31Q96LW9 406 aaPredicted RBP17.72■□□□□ 0.43
SGMS1-209ENST00000609445 SMOC2Q9H3U7 446 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 PRMT7Q9NVM4 692 aaPredicted RBP17.72■□□□□ 0.43
SGMS1-209ENST00000609445 CACNG4Q9UBN1 327 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 STK39Q9UEW8 545 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 PARP2Q9UGN5 583 aa17.72■□□□□ 0.43
SGMS1-209ENST00000609445 CACNA1HO95180 2353 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 ARHGEF35A5YM69 484 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 EDN1P05305 212 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 HMGN5P82970 282 aaKnown RBP17.71■□□□□ 0.43
SGMS1-209ENST00000609445 ORC2Q13416 577 aaPredicted RBP17.71■□□□□ 0.43
SGMS1-209ENST00000609445 ZBTB8OSQ8IWT0 167 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 SUGP1Q8IWZ8 645 aaKnown RBP17.71■□□□□ 0.43
SGMS1-209ENST00000609445 HACE1Q8IYU2 909 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 RNF168Q8IYW5 571 aaPredicted RBP17.71■□□□□ 0.43
SGMS1-209ENST00000609445 FBXL6Q8N531 539 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 TDRD5Q8NAT2 981 aaKnown RBP17.71■□□□□ 0.43
SGMS1-209ENST00000609445 FAM184AQ8NB25 1140 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 PRSS33Q8NF86 280 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 ERMNQ8TAM6 284 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 B3GALT6Q96L58 329 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 RPS6KC1Q96S38 1066 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 KCNH6Q9H252 994 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 FZD8Q9H461 694 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 SFXN1Q9H9B4 322 aa17.71■□□□□ 0.43
SGMS1-209ENST00000609445 TRIP11Q15643 1979 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 TEX28O15482 410 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 BRD1O95696 1058 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 LIG1P18858 919 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 CYP11B2P19099 503 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 CCT6AP40227 531 aaKnown RBP17.7■□□□□ 0.42
SGMS1-209ENST00000609445 GLUD2P49448 558 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 RBM25P49756 843 aaKnown RBP17.7■□□□□ 0.42
SGMS1-209ENST00000609445 VCPP55072 806 aaKnown RBP17.7■□□□□ 0.42
SGMS1-209ENST00000609445 KIAA0319Q5VV43 1072 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 GPR149Q86SP6 731 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 COLEC11Q9BWP8 271 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 GPR62Q9BZJ7 368 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 CXCL16Q9H2A7 254 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 PDZD7Q9H5P4 517 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 MAN1C1Q9NR34 630 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 SH2B1Q9NRF2 756 aaPredicted RBP17.7■□□□□ 0.42
SGMS1-209ENST00000609445 LIMD1Q9UGP4 676 aa17.7■□□□□ 0.42
SGMS1-209ENST00000609445 MTCL1Q9Y4B5 1905 aaKnown RBP17.7■□□□□ 0.42
SGMS1-209ENST00000609445 PRKCBP05771 671 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 TOB1P50616 345 aaPredicted RBP17.69■□□□□ 0.42
SGMS1-209ENST00000609445 FXR2P51116 673 aaKnown RBP eCLIP17.69■□□□□ 0.42
SGMS1-209ENST00000609445 DSG1Q02413 1049 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 GRIK3Q13003 919 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 FAM187BQ17R55 369 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 TMEM132AQ24JP5 1023 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 EEF1DP3Q658K8 133 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 FUT10Q6P4F1 479 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 PRIMPOLQ96LW4 560 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 PAAF1Q9BRP4 392 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 KIFC3Q9BVG8 833 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 CCDC113Q9H0I3 377 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 SNTG2Q9NY99 539 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 NOL7Q9UMY1 257 aaKnown RBP17.69■□□□□ 0.42
SGMS1-209ENST00000609445 SORCS3Q9UPU3 1222 aa17.69■□□□□ 0.42
SGMS1-209ENST00000609445 NR1I2O75469 434 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 ADH1AP07327 375 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 SPATA31D3P0C874 917 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 NAMPTP43490 491 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 TRAPPC10P48553 1259 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 PRPF4BQ13523 1007 aaKnown RBP17.68■□□□□ 0.42
SGMS1-209ENST00000609445 HAUS3Q68CZ6 603 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 SPATA31D4Q6ZUB0 917 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 GLYCTKQ8IVS8 523 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 ZDHHC14Q8IZN3 488 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 DEPTORQ8TB45 409 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 C2orf40Q9H1Z8 148 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 BHMT2Q9H2M3 363 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 RXFP1Q9HBX9 757 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 CHST7Q9NS84 486 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 LRWD1Q9UFC0 647 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 ADAM28Q9UKQ2 775 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 KIAA1024Q9UPX6 916 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 SSX2IPQ9Y2D8 614 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 PCDHB6Q9Y5E3 794 aa17.68■□□□□ 0.42
SGMS1-209ENST00000609445 PTGESO14684 152 aa17.67■□□□□ 0.42
SGMS1-209ENST00000609445 N4BP3O15049 544 aa17.67■□□□□ 0.42
SGMS1-209ENST00000609445 GLUD1P00367 558 aa17.67■□□□□ 0.42
SGMS1-209ENST00000609445 U2AF2P26368 475 aaKnown RBP eCLIP17.67■□□□□ 0.422e-6■■■■□ 21.4
SGMS1-209ENST00000609445 PTGDRQ13258 359 aa17.67■□□□□ 0.42
SGMS1-209ENST00000609445 MTMR3Q13615 1198 aa17.67■□□□□ 0.42
SGMS1-209ENST00000609445 MAPK6Q16659 721 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms