RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 A0A1W2PQC6 194 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 OGTO15294 1046 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 TFRCP02786 760 aaKnown RBP17.99■□□□□ 0.47
PMF1-206ENST00000606952 ADRB2P07550 413 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 TPM2P07951 284 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 HOXA11P31270 313 aaPredicted RBP17.99■□□□□ 0.47
PMF1-206ENST00000606952 PLCB2Q00722 1185 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 CCDC173Q0VFZ6 552 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 BFSP1Q12934 665 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 SNRNP35Q16560 246 aaKnown RBP17.99■□□□□ 0.47
PMF1-206ENST00000606952 KYAT1Q16773 422 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 VWA3BQ502W6 1294 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 EEF1DP3Q658K8 133 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 CRELD2Q6UXH1 353 aaPredicted RBP17.99■□□□□ 0.47
PMF1-206ENST00000606952 TOX2Q96NM4 488 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 NOC4LQ9BVI4 516 aaKnown RBP17.99■□□□□ 0.47
PMF1-206ENST00000606952 CDT1Q9H211 546 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 NDST4Q9H3R1 872 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 PCIF1Q9H4Z3 704 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 NOD1Q9Y239 953 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 USP20Q9Y2K6 914 aa17.99■□□□□ 0.47
PMF1-206ENST00000606952 KIAA0100Q14667 2235 aaKnown RBP17.98■□□□□ 0.47
PMF1-206ENST00000606952 PMM2O15305 246 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 CLDN10P78369 228 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 CYP24A1Q07973 514 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 DCAF4L1Q3SXM0 396 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 ZNF568Q3ZCX4 644 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 SLC39A5Q6ZMH5 540 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 CATSPER4Q7RTX7 472 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 FAM228AQ86W67 206 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 CBWD2Q8IUF1 395 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 VSTM4Q8IW00 320 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 USP38Q8NB14 1042 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 ZSWIM2Q8NEG5 633 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 ERGIC2Q96RQ1 377 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 MSTO1Q9BUK6 570 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 TRPV6Q9H1D0 765 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 VPS16Q9H269 839 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.98■□□□□ 0.475e-26■■■■■ 153.1
PMF1-206ENST00000606952 ITIH6Q6UXX5 1313 aa17.98■□□□□ 0.47
PMF1-206ENST00000606952 GTPBP10A4D1E9 387 aaKnown RBP17.97■□□□□ 0.47
PMF1-206ENST00000606952 ZNF233A6NK53 670 aa17.97■□□□□ 0.47
PMF1-206ENST00000606952 CSDE1O75534 798 aaKnown RBP17.97■□□□□ 0.47
PMF1-206ENST00000606952 CKBP12277 381 aa17.97■□□□□ 0.47
PMF1-206ENST00000606952 THPOP40225 353 aa17.97■□□□□ 0.47
PMF1-206ENST00000606952 PSMD6Q15008 389 aa17.97■□□□□ 0.47
PMF1-206ENST00000606952 FBXO47Q5MNV8 452 aa17.97■□□□□ 0.47
PMF1-206ENST00000606952 APBB1IPQ7Z5R6 666 aaPredicted RBP17.97■□□□□ 0.47
PMF1-206ENST00000606952 BRSK2Q8IWQ3 736 aa17.97■□□□□ 0.47
PMF1-206ENST00000606952 CCDC155Q8N6L0 562 aa17.97■□□□□ 0.47
PMF1-206ENST00000606952 PLEKHO2Q8TD55 490 aa17.97■□□□□ 0.47
PMF1-206ENST00000606952 SAAL1Q96ER3 474 aa17.97■□□□□ 0.47
PMF1-206ENST00000606952 ANKFY1Q9P2R3 1169 aa17.97■□□□□ 0.47
PMF1-206ENST00000606952 CPSF3Q9UKF6 684 aaKnown RBP17.97■□□□□ 0.47
PMF1-206ENST00000606952 NOC2LQ9Y3T9 749 aaKnown RBP17.97■□□□□ 0.47
PMF1-206ENST00000606952 PDCD11Q14690 1871 aaKnown RBP17.97■□□□□ 0.47
PMF1-206ENST00000606952 CITO14578 2027 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 BRCA2P51587 3418 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 PITPNM1O00562 1244 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 TLR3O15455 904 aaKnown RBP17.96■□□□□ 0.47
PMF1-206ENST00000606952 P4HA2O15460 535 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 TEX33O43247 280 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 KRT13P13646 458 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 VAMP7P51809 220 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 NCBP1Q09161 790 aaKnown RBP17.96■□□□□ 0.47
PMF1-206ENST00000606952 KCNH2Q12809 1159 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 C1orf220Q5T0J3 134 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 NOTUMQ6P988 496 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 PARD3BQ8TEW8 1205 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 FAM213AQ9BRX8 229 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 ERVK-5Q9HDB9 667 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 CHST12Q9NRB3 414 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 GINS2Q9Y248 185 aa17.96■□□□□ 0.47
PMF1-206ENST00000606952 GOLGA8IPA6NC78 632 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 GOLGA8JA6NMD2 632 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 AFPP02771 609 aaKnown RBP17.95■□□□□ 0.46
PMF1-206ENST00000606952 FGFR4P22455 802 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 GTF2H1P32780 548 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 FKBP15Q5T1M5 1219 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 ZNF618Q5T7W0 954 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 SLC27A1Q6PCB7 646 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 USP37Q86T82 979 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 DIS3LQ8TF46 1054 aaKnown RBP17.95■□□□□ 0.46
PMF1-206ENST00000606952 CPB2Q96IY4 423 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 ADPGKQ9BRR6 497 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 TMEM106CQ9BVX2 250 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 TRAIPQ9BWF2 469 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 IMPACTQ9P2X3 320 aa17.95■□□□□ 0.46
PMF1-206ENST00000606952 GPR182O15218 404 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 STX10O60499 249 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 N4BP1O75113 896 aaKnown RBP17.94■□□□□ 0.46
PMF1-206ENST00000606952 RPS6KA5O75582 802 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 CLTAP09496 248 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 CTSHP09668 335 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 GRM5P41594 1212 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 UBXN1Q04323 297 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 BFSP2Q13515 415 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 LPIN1Q14693 890 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 SURF1Q15526 300 aa17.94■□□□□ 0.46
PMF1-206ENST00000606952 ZBTB41Q5SVQ8 909 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms