RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TCF25Q9BQ70 676 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 REEP2Q9BRK0 252 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 TLE6Q9H808 572 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 C17orf75Q9HAS0 396 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 SNTG2Q9NY99 539 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 KCND2Q9NZV8 630 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 LZTS1Q9Y250 596 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 GIT1Q9Y2X7 761 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 PHLPP2Q6ZVD8 1323 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 SPTLC2O15270 562 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 LINC01565O15544 149 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 FAM13AO94988 1023 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 ALDH2P05091 517 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 PDIA4P13667 645 aaKnown RBP15.85■□□□□ 0.13
TUBE1-208ENST00000604743 DDIT3P35638 169 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 OR1G1P47890 313 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 SMTNP53814 917 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 RRAGBQ5VZM2 374 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 TAS1R3Q7RTX0 852 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 ZBTB33Q86T24 672 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 LINC00301Q8NCQ3 95 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 IGSF21Q96ID5 467 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 RPS6KC1Q96S38 1066 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 TMEM134Q9H6X4 195 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 ARHGAP28Q9P2N2 729 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 FAN1Q9Y2M0 1017 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 GDAQ9Y2T3 454 aa15.85■□□□□ 0.13
TUBE1-208ENST00000604743 PRG3Q9Y2Y8 225 aaPredicted RBP15.85■□□□□ 0.13
TUBE1-208ENST00000604743 RBM19Q9Y4C8 960 aaKnown RBP15.85■□□□□ 0.13
TUBE1-208ENST00000604743 NRP1O14786 923 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 FSCN2O14926 492 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 NCK2O43639 380 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 BMP1P13497 986 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 STRN3Q13033 797 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 GIT2Q14161 759 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 CLUL1Q15846 466 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 DCAF4L1Q3SXM0 396 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 VPS52Q8N1B4 723 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 MYCT1Q8N699 235 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 PDILTQ8N807 584 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 ADAMTS19Q8TE59 1207 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 BCL7CQ8WUZ0 217 aaPredicted RBP15.84■□□□□ 0.13
TUBE1-208ENST00000604743 ACO2Q99798 780 aaKnown RBP15.84■□□□□ 0.13
TUBE1-208ENST00000604743 TCHPQ9BT92 498 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 TARS2Q9BW92 718 aaKnown RBP15.84■□□□□ 0.13
TUBE1-208ENST00000604743 MRPL4Q9BYD3 311 aaKnown RBP15.84■□□□□ 0.13
TUBE1-208ENST00000604743 LARSQ9P2J5 1176 aaKnown RBP15.84■□□□□ 0.13
TUBE1-208ENST00000604743 KCNG1Q9UIX4 513 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 CITO14578 2027 aa15.84■□□□□ 0.13
TUBE1-208ENST00000604743 CUL9Q8IWT3 2517 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 HIDE1A8MVS5 230 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 TBCAO75347 108 aaKnown RBP15.83■□□□□ 0.12
TUBE1-208ENST00000604743 RECQL4O94761 1208 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 HARSP12081 509 aaKnown RBP15.83■□□□□ 0.12
TUBE1-208ENST00000604743 NDUFV1P49821 464 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 OSTNP61366 133 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 DLX2Q07687 328 aaPredicted RBP15.83■□□□□ 0.12
TUBE1-208ENST00000604743 ADAM15Q13444 863 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 ZNF568Q3ZCX4 644 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 PDE12Q6L8Q7 609 aaKnown RBP15.83■□□□□ 0.12
TUBE1-208ENST00000604743 DYMQ7RTS9 669 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 COLGALT2Q8IYK4 626 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 TMEM161BQ8NDZ6 487 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.83■□□□□ 0.12
TUBE1-208ENST00000604743 SPIRE2Q8WWL2 714 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 AUTS2Q8WXX7 1259 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 TMEM175Q9BSA9 504 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 NTPCRQ9BSD7 190 aaKnown RBP15.83■□□□□ 0.12
TUBE1-208ENST00000604743 NGRNQ9NPE2 291 aaKnown RBP15.83■□□□□ 0.12
TUBE1-208ENST00000604743 STK17AQ9UEE5 414 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 ODF2LQ9ULJ1 636 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 TNFSF13BQ9Y275 285 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 VCANP13611 3396 aa15.83■□□□□ 0.12
TUBE1-208ENST00000604743 TCHHQ07283 1943 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 CARNS1A5YM72 827 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 K7ENM7 598 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 INPPL1O15357 1258 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 YEATS4O95619 227 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 CXCL14O95715 111 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 MAPTP10636 758 aaKnown RBP15.82■□□□□ 0.12
TUBE1-208ENST00000604743 LTBRP36941 435 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 STAT6P42226 847 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 MATR3P43243 847 aaKnown RBP eCLIP15.82■□□□□ 0.12
TUBE1-208ENST00000604743 RBM10P98175 930 aaKnown RBP15.82■□□□□ 0.12
TUBE1-208ENST00000604743 SMC1AQ14683 1233 aaKnown RBP15.82■□□□□ 0.12
TUBE1-208ENST00000604743 BMS1Q14692 1282 aaKnown RBP15.82■□□□□ 0.12
TUBE1-208ENST00000604743 LEXMQ3ZCV2 418 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 PTCRAQ6ISU1 281 aaPredicted RBP15.82■□□□□ 0.12
TUBE1-208ENST00000604743 LLGL2Q6P1M3 1020 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 CCDC73Q6ZRK6 1079 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 SV2BQ7L1I2 683 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 APBB1IPQ7Z5R6 666 aaPredicted RBP15.82■□□□□ 0.12
TUBE1-208ENST00000604743 DDX53Q86TM3 631 aaKnown RBP15.82■□□□□ 0.12
TUBE1-208ENST00000604743 CEP120Q8N960 986 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 GSTCDQ8NEC7 633 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 RABGGTAQ92696 567 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 BICD1Q96G01 975 aa15.82■□□□□ 0.12
TUBE1-208ENST00000604743 ZBTB45Q96K62 511 aaPredicted RBP15.82■□□□□ 0.12
TUBE1-208ENST00000604743 NECAB3Q96P71 396 aaPredicted RBP15.82■□□□□ 0.12
TUBE1-208ENST00000604743 CXCL16Q9H2A7 254 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms