RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	TIPIN	Q9BVW5	301 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	MARCH5	Q9NX47	278 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	DAXX	Q9UER7	740 aa	Predicted RBP	13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	STK39	Q9UEW8	545 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	VWA8	A3KMH1	1905 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	PHLPP2	Q6ZVD8	1323 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	C2orf16	Q68DN1	1984 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223		K7ELQ4	463 aa	Predicted RBP	13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	CLASP2	O75122	1294 aa	Known RBP	13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	LIG1	P18858	919 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	GUCY2C	P25092	1073 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	SSTR3	P32745	418 aa	Predicted RBP	13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	NPTX2	P47972	431 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	SLC12A3	P55017	1021 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	GRIK3	Q13003	919 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	SF3A1	Q15459	793 aa	Known RBP	13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	ZRSR1	Q15695	479 aa	Known RBP	13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	TMEM132A	Q24JP5	1023 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	EEF1DP3	Q658K8	133 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	ANKRD54	Q6NXT1	300 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	CABP7	Q86V35	215 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	AUTS2	Q8WXX7	1259 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	CASP10	Q92851	521 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	CDK5RAP3	Q96JB5	506 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	DRC1	Q96MC2	740 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	ADPGK	Q9BRR6	497 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	C17orf75	Q9HAS0	396 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	ARHGAP28	Q9P2N2	729 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	PARP2	Q9UGN5	583 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	USP20	Q9Y2K6	914 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	USP15	Q9Y4E8	981 aa	Predicted RBP	13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	HCFC2	Q9Y5Z7	792 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	MYO10	Q9HD67	2058 aa		13.67	□□□□□ -0.22
STRN4-223	ENST00000602223	DENND4A	Q7Z401	1863 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	CCDC169	A6NNP5	214 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223		K7ERI5	159 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	EFEMP2	O95967	443 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	SYT1	P21579	422 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	CA8	P35219	290 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	LONP1	P36776	959 aa	Known RBP	13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	OR1G1	P47890	313 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	GRIN1	Q05586	938 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	REST	Q13127	1097 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	DMP1	Q13316	513 aa	Predicted RBP	13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	PTPN14	Q15678	1187 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	DCAF4L1	Q3SXM0	396 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	NT5DC1	Q5TFE4	455 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	LLGL2	Q6P1M3	1020 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	SYCE2	Q6PIF2	218 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	RNF168	Q8IYW5	571 aa	Predicted RBP	13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	SUSD6	Q92537	303 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	RPS6KC1	Q96S38	1066 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	PLIN2	Q99541	437 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	POP1	Q99575	1024 aa	Known RBP	13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	HERC2P3	Q9BVR0	1158 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	S1PR5	Q9H228	398 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	EPHX3	Q9H6B9	360 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	TMEM134	Q9H6X4	195 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	SNTG2	Q9NY99	539 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	KCND2	Q9NZV8	630 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	KLK14	Q9P0G3	267 aa		13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.66	□□□□□ -0.22
STRN4-223	ENST00000602223	PI4K2B	G5E9Z4	385 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	LILRB3	O75022	631 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	RECQL4	O94761	1208 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	SOD2	P04179	222 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	SSB	P05455	408 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	PLA2G4B	P0C869	781 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	HOXB8	P17481	243 aa	Predicted RBP	13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	UBA7	P41226	1012 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	PTPA	Q15257	358 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	ATF7IP2	Q5U623	682 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	TAS1R3	Q7RTX0	852 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	SNX21	Q969T3	373 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	CALML4	Q96GE6	196 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	NTPCR	Q9BSD7	190 aa	Known RBP	13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	COLEC11	Q9BWP8	271 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	C1QTNF1	Q9BXJ1	281 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	KMT5A	Q9NQR1	393 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	TNFSF13B	Q9Y275	285 aa		13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	RBM19	Q9Y4C8	960 aa	Known RBP	13.65	□□□□□ -0.22
STRN4-223	ENST00000602223	SFI1	A8K8P3	1242 aa		13.64	□□□□□ -0.23
STRN4-223	ENST00000602223	PTGES	O14684	152 aa		13.64	□□□□□ -0.23
STRN4-223	ENST00000602223	NR1I2	O75469	434 aa		13.64	□□□□□ -0.23
STRN4-223	ENST00000602223	LRRC15	Q8TF66	581 aa		13.64	□□□□□ -0.23
STRN4-223	ENST00000602223	SLC22A17	Q8WUG5	538 aa		13.64	□□□□□ -0.23
STRN4-223	ENST00000602223	SPIRE2	Q8WWL2	714 aa		13.64	□□□□□ -0.23
STRN4-223	ENST00000602223	ACO2	Q99798	780 aa	Known RBP	13.64	□□□□□ -0.23
STRN4-223	ENST00000602223	MRPL4	Q9BYD3	311 aa	Known RBP	13.64	□□□□□ -0.23
STRN4-223	ENST00000602223	KCNG1	Q9UIX4	513 aa		13.64	□□□□□ -0.23
STRN4-223	ENST00000602223	MTMR6	Q9Y217	621 aa		13.64	□□□□□ -0.23
STRN4-223	ENST00000602223	CLIC4	Q9Y696	253 aa		13.64	□□□□□ -0.23
STRN4-223	ENST00000602223		F8W810	466 aa		13.63	□□□□□ -0.23
STRN4-223	ENST00000602223	SLC16A4	O15374	487 aa		13.63	□□□□□ -0.23
STRN4-223	ENST00000602223	UROD	P06132	367 aa		13.63	□□□□□ -0.23
STRN4-223	ENST00000602223	CNP	P09543	421 aa	Known RBP	13.63	□□□□□ -0.23
STRN4-223	ENST00000602223	PLS3	P13797	630 aa		13.63	□□□□□ -0.23
STRN4-223	ENST00000602223	EPCAM	P16422	314 aa		13.63	□□□□□ -0.23
STRN4-223	ENST00000602223	RAD51AP2	Q09MP3	1159 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms