RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MAN1C1Q9NR34 630 aa14.6□□□□□ -0.07
RPS28-204ENST00000602140 FAM86C1Q9NVL1 165 aa14.6□□□□□ -0.07
RPS28-204ENST00000602140 PPP4R2Q9NY27 417 aa14.6□□□□□ -0.07
RPS28-204ENST00000602140 A0A1B0GUA9 196 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 LRRIQ4A6NIV6 560 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 SPATA31C1P0DKV0 1188 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 MYBP10242 640 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 GUCY1B3Q02153 619 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 ST3GAL1Q11201 340 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 SLC27A1Q6PCB7 646 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 C15orf39Q6ZRI6 1047 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 CATSPER3Q86XQ3 398 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 RNF168Q8IYW5 571 aaPredicted RBP14.59□□□□□ -0.07
RPS28-204ENST00000602140 GSTCDQ8NEC7 633 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 COLEC11Q9BWP8 271 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 RXFP1Q9HBX9 757 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 KLK14Q9P0G3 267 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 PARP2Q9UGN5 583 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 MYO10Q9HD67 2058 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 DENND4AQ7Z401 1863 aa14.59□□□□□ -0.07
RPS28-204ENST00000602140 CCDC195A0A1B0GUA6 201 aa14.58□□□□□ -0.08
RPS28-204ENST00000602140 MED24O75448 989 aa14.58□□□□□ -0.08
RPS28-204ENST00000602140 GLUD1P00367 558 aa14.58□□□□□ -0.08
RPS28-204ENST00000602140 DSG1Q02413 1049 aa14.58□□□□□ -0.08
RPS28-204ENST00000602140 SAFBQ15424 915 aaKnown RBP eCLIP14.58□□□□□ -0.08
RPS28-204ENST00000602140 CMASQ8NFW8 434 aaPredicted RBP14.58□□□□□ -0.08
RPS28-204ENST00000602140 ATOH1Q92858 354 aaPredicted RBP14.58□□□□□ -0.08
RPS28-204ENST00000602140 B3GALT6Q96L58 329 aa14.58□□□□□ -0.08
RPS28-204ENST00000602140 GPR62Q9BZJ7 368 aa14.58□□□□□ -0.08
RPS28-204ENST00000602140 TUFT1Q9NNX1 390 aa14.58□□□□□ -0.08
RPS28-204ENST00000602140 CHST7Q9NS84 486 aa14.58□□□□□ -0.08
RPS28-204ENST00000602140 DPP7Q9UHL4 492 aa14.58□□□□□ -0.08
RPS28-204ENST00000602140 USP34Q70CQ2 3546 aa14.58□□□□□ -0.08
RPS28-204ENST00000602140 H0Y858 1186 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 GALR2O43603 387 aaPredicted RBP14.57□□□□□ -0.08
RPS28-204ENST00000602140 RFPL2O75678 378 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 SPATA31D3P0C874 917 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 NUBP1P53384 320 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 GRIK3Q13003 919 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 FUT10Q6P4F1 479 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 ELMSAN1Q6PJG2 1045 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 SPATA31D4Q6ZUB0 917 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 ZBTB8OSQ8IWT0 167 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 TMEM105Q8N8V8 129 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 MCPH1Q8NEM0 835 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 RABGGTAQ92696 567 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 NACC1Q96RE7 527 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 IRF2BPLQ9H1B7 796 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 MFSD1Q9H3U5 465 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 KCNK12Q9HB15 430 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 PRMT7Q9NVM4 692 aaPredicted RBP14.57□□□□□ -0.08
RPS28-204ENST00000602140 ADAM28Q9UKQ2 775 aa14.57□□□□□ -0.08
RPS28-204ENST00000602140 TDRD15B5MCY1 1934 aaKnown RBP14.56□□□□□ -0.08
RPS28-204ENST00000602140 TTLL13PA6NNM8 815 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 EIF5BO60841 1220 aaKnown RBP14.56□□□□□ -0.08
RPS28-204ENST00000602140 SEC24BO95487 1268 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 TDGQ13569 410 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 ZNF174Q15697 407 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 USP41Q3LFD5 358 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 CDCA2Q69YH5 1023 aaPredicted RBP14.56□□□□□ -0.08
RPS28-204ENST00000602140 ASTLQ6HA08 431 aaPredicted RBP14.56□□□□□ -0.08
RPS28-204ENST00000602140 POTEGQ6S5H5 508 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 PALB2Q86YC2 1186 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 GLYCTKQ8IVS8 523 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 CCDC83Q8IWF9 413 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 C8orf76Q96K31 380 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 PRIMPOLQ96LW4 560 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 POLR3CQ9BUI4 534 aaPredicted RBP14.56□□□□□ -0.08
RPS28-204ENST00000602140 FZD8Q9H461 694 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 WDR6Q9NNW5 1121 aaKnown RBP14.56□□□□□ -0.08
RPS28-204ENST00000602140 CACNG4Q9UBN1 327 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 PLXNA3P51805 1871 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 ZMYM2Q9UBW7 1377 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 C2orf16Q68DN1 1984 aa14.56□□□□□ -0.08
RPS28-204ENST00000602140 ARHGEF35A5YM69 484 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 N4BP1O75113 896 aaKnown RBP14.55□□□□□ -0.08
RPS28-204ENST00000602140 TADA2AO75478 443 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 OR52Z1P0C646 297 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 RPA1P27694 616 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 GBP2P32456 591 aaPredicted RBP14.55□□□□□ -0.08
RPS28-204ENST00000602140 FAM187BQ17R55 369 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 TMEM132AQ24JP5 1023 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 PADI6Q6TGC4 694 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 CYP26C1Q6V0L0 522 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 ERMNQ8TAM6 284 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 HDAC7Q8WUI4 952 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 RIN2Q8WYP3 895 aaPredicted RBP14.55□□□□□ -0.08
RPS28-204ENST00000602140 BSNDQ8WZ55 320 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 SMG7Q92540 1137 aaKnown RBP14.55□□□□□ -0.08
RPS28-204ENST00000602140 PAAF1Q9BRP4 392 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 RHOBTB2Q9BYZ6 727 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 C2orf40Q9H1Z8 148 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 PLEKHA4Q9H4M7 779 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 PDZD7Q9H5P4 517 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.55□□□□□ -0.082e-11■■□□□ 13.6
RPS28-204ENST00000602140 DUSP12Q9UNI6 340 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 LIMCH1Q9UPQ0 1083 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 USP20Q9Y2K6 914 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 CLUHO75153 1309 aa14.55□□□□□ -0.08
RPS28-204ENST00000602140 CASTOR2A6NHX0 329 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms