RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ERVFC1P60507 584 aa17.32■□□□□ 0.36
RPS28-203ENST00000600659 CSPP1Q1MSJ5 1256 aa17.32■□□□□ 0.36
RPS28-203ENST00000600659 CCDC73Q6ZRK6 1079 aa17.32■□□□□ 0.36
RPS28-203ENST00000600659 ADGRD2Q7Z7M1 963 aa17.32■□□□□ 0.36
RPS28-203ENST00000600659 TARS2Q9BW92 718 aaKnown RBP17.32■□□□□ 0.36
RPS28-203ENST00000600659 VN1R3Q9BXE9 311 aa17.32■□□□□ 0.36
RPS28-203ENST00000600659 PANK2Q9BZ23 570 aa17.32■□□□□ 0.36
RPS28-203ENST00000600659 TRIM6Q9C030 488 aaPredicted RBP17.32■□□□□ 0.36
RPS28-203ENST00000600659 CDT1Q9H211 546 aa17.32■□□□□ 0.36
RPS28-203ENST00000600659 PARVGQ9HBI0 331 aa17.32■□□□□ 0.36
RPS28-203ENST00000600659 UBN1Q9NPG3 1134 aa17.32■□□□□ 0.36
RPS28-203ENST00000600659 SNTG2Q9NY99 539 aa17.32■□□□□ 0.36
RPS28-203ENST00000600659 LARSQ9P2J5 1176 aaKnown RBP17.32■□□□□ 0.36
RPS28-203ENST00000600659 LZTS1Q9Y250 596 aa17.32■□□□□ 0.36
RPS28-203ENST00000600659 ANK1P16157 1881 aa17.32■□□□□ 0.36
RPS28-203ENST00000600659 TCF20Q9UGU0 1960 aaKnown RBP17.31■□□□□ 0.36
RPS28-203ENST00000600659 FRMD3A2A2Y4 597 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 PTGESO14684 152 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 MEFVO15553 781 aaPredicted RBP17.31■□□□□ 0.36
RPS28-203ENST00000600659 RECQL4O94761 1208 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 CSPG5O95196 566 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 BECN1Q14457 450 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 NAB2Q15742 525 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 DCAF4L1Q3SXM0 396 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 COLGALT2Q8IYK4 626 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 PDILTQ8N807 584 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 MRPS27Q92552 414 aaKnown RBP17.31■□□□□ 0.36
RPS28-203ENST00000600659 DDX12PQ92771 950 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 ZBTB45Q96K62 511 aaPredicted RBP17.31■□□□□ 0.36
RPS28-203ENST00000600659 MRPL4Q9BYD3 311 aaKnown RBP17.31■□□□□ 0.36
RPS28-203ENST00000600659 HAPLN2Q9GZV7 340 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 MARCH5Q9NX47 278 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 KLK14Q9P0G3 267 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 THEGQ9P2T0 379 aa17.31■□□□□ 0.36
RPS28-203ENST00000600659 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.3■□□□□ 0.36
RPS28-203ENST00000600659 FAM13AO94988 1023 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 EFEMP2O95967 443 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 GTF2F1P35269 517 aaKnown RBP eCLIP17.3■□□□□ 0.36
RPS28-203ENST00000600659 PPM1AP35813 382 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 STAT6P42226 847 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 TFF2Q03403 129 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 HYAL1Q12794 435 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 RESP18Q5W5W9 173 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 DYMQ7RTS9 669 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 HAUS6Q7Z4H7 955 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 SLC17A8Q8NDX2 589 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 URGCPQ8TCY9 931 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 LEO1Q8WVC0 666 aaPredicted RBP17.3■□□□□ 0.36
RPS28-203ENST00000600659 IGSF21Q96ID5 467 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 TMEM175Q9BSA9 504 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 GBP3Q9H0R5 595 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 TLR9Q9NR96 1032 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 SPG21Q9NZD8 308 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 CFAP45Q9UL16 551 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 VWA8A3KMH1 1905 aa17.3■□□□□ 0.36
RPS28-203ENST00000600659 F8W810 466 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 TRAK2O60296 914 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 PPP1R37O75864 691 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 NMT1P30419 496 aaKnown RBP17.29■□□□□ 0.36
RPS28-203ENST00000600659 SMTNP53814 917 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 CTC1Q2NKJ3 1217 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 ZNF568Q3ZCX4 644 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 SLC39A4Q6P5W5 647 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 MPZL3Q6UWV2 235 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 SV2BQ7L1I2 683 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 SFR1Q86XK3 245 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 MYCT1Q8N699 235 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 ADPGKQ9BRR6 497 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 STRA6Q9BX79 667 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 ST6GALNAC4Q9H4F1 302 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 KBTBD4Q9NVX7 518 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 KANSL3Q9P2N6 904 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 TTC28Q96AY4 2481 aa17.29■□□□□ 0.36
RPS28-203ENST00000600659 K7ENM7 598 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 NRP1O14786 923 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 FAM189A1O60320 539 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 PIGRP01833 764 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 GRM5P41594 1212 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 ALDH7A1P49419 539 aaKnown RBP17.28■□□□□ 0.36
RPS28-203ENST00000600659 GTF2BQ00403 316 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 RNASELQ05823 741 aaKnown RBP17.28■□□□□ 0.36
RPS28-203ENST00000600659 GRIK3Q13003 919 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 SKIV2LQ15477 1246 aaKnown RBP17.28■□□□□ 0.36
RPS28-203ENST00000600659 ZPBP2Q6X784 338 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 RNF168Q8IYW5 571 aaPredicted RBP17.28■□□□□ 0.36
RPS28-203ENST00000600659 STAMQ92783 540 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 FGFBP2Q9BYJ0 223 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 ZBP1Q9H171 429 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 UBE2ZQ9H832 354 aaPredicted RBP17.28■□□□□ 0.36
RPS28-203ENST00000600659 CACNG4Q9UBN1 327 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 PARP2Q9UGN5 583 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 KCNG1Q9UIX4 513 aa17.28■□□□□ 0.36
RPS28-203ENST00000600659 HIDE1A8MVS5 230 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 LINC01565O15544 149 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 TBCAO75347 108 aaKnown RBP17.27■□□□□ 0.36
RPS28-203ENST00000600659 TOM1L1O75674 476 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 GLP2RO95838 553 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 KRT18P05783 430 aaKnown RBP17.27■□□□□ 0.36
RPS28-203ENST00000600659 MCF2P10911 925 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 LTBRP36941 435 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms