RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 PPATQ06203 517 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 RNF207Q6ZRF8 634 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 FBXO41Q8TF61 875 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 ART4Q93070 314 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 FAM136AQ96C01 138 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 NSUN4Q96CB9 384 aaKnown RBP17.21■□□□□ 0.35
SYDE1-204ENST00000600440 DDX25Q9UHL0 483 aaKnown RBP17.21■□□□□ 0.35
SYDE1-204ENST00000600440 TTC7AQ9ULT0 858 aaPredicted RBP17.21■□□□□ 0.35
SYDE1-204ENST00000600440 E7ENQ6 273 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 TBX10O75333 385 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 PIAS1O75925 651 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 SOX5P35711 763 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 ITGA8P53708 1063 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 DRG2P55039 364 aaKnown RBP17.2■□□□□ 0.34
SYDE1-204ENST00000600440 ZBTB16Q05516 673 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 LRRC36Q1X8D7 754 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 ACSBG2Q5FVE4 666 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 PHLDB2Q86SQ0 1253 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 PDCD7Q8N8D1 485 aaKnown RBP17.2■□□□□ 0.34
SYDE1-204ENST00000600440 OPTNQ96CV9 577 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 SIX2Q9NPC8 291 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 AAASQ9NRG9 546 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 GALNT8Q9NY28 637 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 MAP3K7O43318 606 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 DCTN3O75935 186 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 ATP5HO75947 161 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 FTLP02792 175 aaPredicted RBP17.2■□□□□ 0.34
SYDE1-204ENST00000600440 MKRN3Q13064 507 aaKnown RBP17.2■□□□□ 0.34
SYDE1-204ENST00000600440 TRMT10CQ7L0Y3 403 aaKnown RBP17.2■□□□□ 0.34
SYDE1-204ENST00000600440 DZIP1Q86YF9 867 aaKnown RBP17.2■□□□□ 0.34
SYDE1-204ENST00000600440 CCDC125Q86Z20 511 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 PIGBQ92521 554 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 MIPEPQ99797 713 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 TMEM109Q9BVC6 243 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 PRDM11Q9NQV5 511 aa17.2■□□□□ 0.34
SYDE1-204ENST00000600440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.2■□□□□ 0.34
SYDE1-204ENST00000600440 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.2■□□□□ 0.34
SYDE1-204ENST00000600440 RSPH10B2B2RC85 870 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 ADAMTS2O95450 1211 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 RSPH10BP0C881 870 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 CA4P22748 312 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 YY1P25490 414 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
SYDE1-204ENST00000600440 ZRSR2Q15696 482 aaKnown RBP17.19■□□□□ 0.34
SYDE1-204ENST00000600440 SGO2Q562F6 1265 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 TNFAIP8L3Q5GJ75 292 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 PPP1R21Q6ZMI0 780 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 C4orf50Q6ZRC1 276 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 GPCPD1Q9NPB8 672 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 FAM47DPA6NHR8 397 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 ABLIM1O14639 778 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 GYG2O15488 501 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 PFDN1O60925 122 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 TTC4O95801 387 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 NR3C1P04150 777 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 SPATA31D3P0C874 917 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 RFC4P35249 363 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 NPEPPSP55786 919 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 WASHC2DQ5SRD0 308 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 SPATA31D4Q6ZUB0 917 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 NLRP9Q7RTR0 991 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 MAPKAPK5Q8IW41 473 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 ZSWIM1Q9BR11 485 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 USP20Q9Y2K6 914 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 CYP11B2P19099 503 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 ADCY7P51828 1080 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 CYP4A11Q02928 519 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 THOC5Q13769 683 aaKnown RBP17.19■□□□□ 0.34
SYDE1-204ENST00000600440 CNPY1Q3B7I2 92 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 ENDOVQ8N8Q3 282 aaKnown RBP17.19■□□□□ 0.34
SYDE1-204ENST00000600440 SLC35C1Q96A29 364 aa17.19■□□□□ 0.34
SYDE1-204ENST00000600440 CADM1Q9BY67 442 aaKnown RBP17.19■□□□□ 0.34
SYDE1-204ENST00000600440 MAGEA13PA6NCF6 341 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 PALM3A6NDB9 673 aaPredicted RBP17.18■□□□□ 0.34
SYDE1-204ENST00000600440 OPHN1O60890 802 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 TPP2P29144 1249 aaPredicted RBP17.18■□□□□ 0.34
SYDE1-204ENST00000600440 CYP2J2P51589 502 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 PPP2R5CQ13362 524 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 TMEM119Q4V9L6 283 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 TGFBRAP1Q8WUH2 860 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 WDR60Q8WVS4 1066 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 TTC1Q99614 292 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 C12orf65Q9H3J6 166 aaKnown RBP17.18■□□□□ 0.34
SYDE1-204ENST00000600440 ACP6Q9NPH0 428 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 PTPN4P29074 926 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 KNOP1Q1ED39 458 aaKnown RBP17.18■□□□□ 0.34
SYDE1-204ENST00000600440 DPY19L2P1Q6NXN4 242 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 KBTBD2Q8IY47 623 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 INPP5DQ92835 1189 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 GRAMD1AQ96CP6 724 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 BICD1Q96G01 975 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 TRAPPC9Q96Q05 1148 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 CCDC87Q9NVE4 849 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 NINJ2Q9NZG7 142 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 PCYOX1Q9UHG3 505 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 LNPEPQ9UIQ6 1025 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 ANAPC5Q9UJX4 755 aa17.18■□□□□ 0.34
SYDE1-204ENST00000600440 DIS3Q9Y2L1 958 aaKnown RBP17.18■□□□□ 0.34
SYDE1-204ENST00000600440 USP17L5A8MUK1 530 aa17.17■□□□□ 0.34
SYDE1-204ENST00000600440 HNRNPRO43390 633 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms