RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 KRT39Q6A163 491 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 B3GNT9Q6UX72 402 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 C4orf19Q8IY42 314 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 MTMR14Q8NCE2 650 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 KREMEN1Q96MU8 473 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 TARS2Q9BW92 718 aaKnown RBP12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 CCDC113Q9H0I3 377 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 NEUROG2Q9H2A3 272 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 RNF14Q9UBS8 474 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 PPP1R37O75864 691 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 PGK2P07205 417 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 COMTP21964 271 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 SV2AQ7L0J3 742 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 TRIM50Q86XT4 487 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 NUP85Q9BW27 656 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 UTP11Q9Y3A2 253 aaKnown RBP12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 GOLGA6L10A0A0M3HER8 536 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 ANKRD62A6NC57 917 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 PLA2G6O60733 806 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 KIAA0754O94854 1291 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 TMEM253P0C7T8 217 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 CD58P19256 250 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 SFNP31947 248 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 MFAP3P55082 362 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 SP2Q02086 613 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 MKRN3Q13064 507 aaKnown RBP12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 CCDC50Q8IVM0 306 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 CCDC26Q8TAB7 109 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 MAGOHBQ96A72 148 aaKnown RBP12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 TRIM7Q9C029 511 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 TAF1DQ9H5J8 278 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 VIPAS39Q9H9C1 493 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 ERVK-5Q9HDB9 667 aa12.41□□□□□ -0.42
ARHGEF1-220ENST00000600274 RGS20O76081 388 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 DDNO94850 711 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 PIK3CAP42336 1068 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 DHX9Q08211 1270 aaKnown RBP12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 TTMPQ5BVD1 217 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZBTB41Q5SVQ8 909 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 C1orf220Q5T0J3 134 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 TREML2Q5T2D2 321 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 DPH6Q7L8W6 267 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 FBXL13Q8NEE6 735 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 C18orf8Q96DM3 657 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 IWS1Q96ST2 819 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 CAPS2Q9BXY5 557 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 RAB20Q9NX57 234 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 CYP39A1Q9NYL5 469 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 DBR1Q9UK59 544 aaKnown RBP12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 FBXL5Q9UKA1 691 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZNF214Q9UL59 606 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 RPTORQ8N122 1335 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 ADM5C9JUS6 153 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 CSDE1O75534 798 aaKnown RBP12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 GJB6O95452 261 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 DSG3P32926 999 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 IGBP1P78318 339 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 GPC5P78333 572 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 GTF2BQ00403 316 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 GUCY1A3Q02108 690 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 CCDC105Q8IYK2 499 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 PARD3BQ8TEW8 1205 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZBED3Q96IU2 234 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 ELP3Q9H9T3 547 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 ATP6V0A4Q9HBG4 840 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 CYP26B1Q9NR63 512 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 C1orf112Q9NSG2 853 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 K7ERI5 159 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 BRD2P25440 801 aaKnown RBP12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 NLRP11P59045 1033 aaKnown RBP12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 TGFB2P61812 414 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 PPFIA1Q13136 1202 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 SCARA5Q6ZMJ2 495 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 LRRC71Q8N4P6 559 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZNF564Q8TBZ8 553 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 EPS8L1Q8TE68 723 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 HEMGNQ9BXL5 484 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZNF408Q9H9D4 720 aa12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 CNOT8Q9UFF9 292 aaKnown RBP12.4□□□□□ -0.42
ARHGEF1-220ENST00000600274 UBE4BO95155 1302 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 NDUFAB1O14561 156 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 DR1Q01658 176 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 GLE1Q53GS7 698 aaKnown RBP12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 WDR44Q5JSH3 913 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 LRRC31Q6UY01 552 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 UBL4BQ8N7F7 174 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 LMO3Q8TAP4 145 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 SLC7A3Q8WY07 619 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 R3HDMLQ9H3Y0 253 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 KLHL11Q9NVR0 708 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 ANAPC7Q9UJX3 599 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 ZNF233A6NK53 670 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 EMC2Q15006 297 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 KRT71Q3SY84 523 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 SEL1L2Q5TEA6 688 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 DCAF12L1Q5VU92 463 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 MIS18BP1Q6P0N0 1132 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 SLC39A4Q6P5W5 647 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 SLC16A10Q8TF71 515 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 PPANQ9NQ55 473 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms