RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 SEZ6Q53EL9 994 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 TAF3Q5VWG9 929 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 CRELD2Q6UXH1 353 aaPredicted RBP15.64■□□□□ 0.09
VRK3-217ENST00000599538 ARMC9Q7Z3E5 817 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 NOP9Q86U38 636 aaKnown RBP15.64■□□□□ 0.09
VRK3-217ENST00000599538 SLC47A2Q86VL8 602 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 DEPTORQ8TB45 409 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 SLC35G2Q8TBE7 412 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 AFAP1L1Q8TED9 768 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 ZBTB10Q96DT7 871 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 PCDHB18PQ96TA0 734 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 GPR20Q99678 358 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 RAB20Q9NX57 234 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 TSKSQ9UJT2 592 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 PTPRJQ12913 1337 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 K7ERI5 159 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 KIF4AO95239 1232 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 ZBTB48P10074 688 aaPredicted RBP15.64■□□□□ 0.09
VRK3-217ENST00000599538 CHRNB2P17787 502 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 OSBPP22059 807 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 GPC3P51654 580 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 ERVK-9P63128 1117 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 SCARA3Q6AZY7 606 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 FASTKD5Q7L8L6 764 aaKnown RBP15.64■□□□□ 0.09
VRK3-217ENST00000599538 FAM71AQ8IYT1 594 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 RPUSD2Q8IZ73 545 aaKnown RBP15.64■□□□□ 0.09
VRK3-217ENST00000599538 FBXL13Q8NEE6 735 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 EPS8L1Q8TE68 723 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 PLEKHA4Q9H4M7 779 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 PDE11AQ9HCR9 933 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 CHORDC1Q9UHD1 332 aaPredicted RBP15.64■□□□□ 0.09
VRK3-217ENST00000599538 INTUQ9ULD6 942 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 A0A0A6YYK5 440 aaPredicted RBP15.63■□□□□ 0.09
VRK3-217ENST00000599538 ZNF233A6NK53 670 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 ZBTB42B2RXF5 422 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 KCNK3O14649 394 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 ATP8B1O43520 1251 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 PAFAH1B1P43034 410 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 ITIH3Q06033 890 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 MKRN4PQ13434 485 aaPredicted RBP15.63■□□□□ 0.09
VRK3-217ENST00000599538 CELF3Q5SZQ8 465 aaKnown RBP15.63■□□□□ 0.09
VRK3-217ENST00000599538 GJC2Q5T442 439 aaPredicted RBP15.63■□□□□ 0.09
VRK3-217ENST00000599538 MAP1SQ66K74 1059 aaPredicted RBP15.63■□□□□ 0.09
VRK3-217ENST00000599538 SLFN11Q7Z7L1 901 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 PSPC1Q8WXF1 523 aaKnown RBP15.63■□□□□ 0.09
VRK3-217ENST00000599538 SHC3Q92529 594 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 GLG1Q92896 1179 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 GDAP1L1Q96MZ0 367 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 UBXN6Q9BZV1 441 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 NRBP2Q9NSY0 501 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 NOCTQ9UK39 431 aaKnown RBP15.63■□□□□ 0.09
VRK3-217ENST00000599538 COG5Q9UP83 839 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 STYXL1Q9Y6J8 313 aa15.63■□□□□ 0.09
VRK3-217ENST00000599538 EXTL3O43909 919 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 BUB1BO60566 1050 aaPredicted RBP15.62■□□□□ 0.09
VRK3-217ENST00000599538 ERLIN1O75477 346 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 TMEM253P0C7T8 217 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 CCDC172P0C7W6 258 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 STRN3Q13033 797 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 RPS6KA1Q15418 735 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 KCTD19Q17RG1 926 aaPredicted RBP15.62■□□□□ 0.09
VRK3-217ENST00000599538 CFAP221Q4G0U5 840 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 FAM160B1Q5W0V3 765 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 CCDC62Q6P9F0 684 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 LRRC71Q8N4P6 559 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 TRAPPC12Q8WVT3 735 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 PRPF31Q8WWY3 499 aaKnown RBP15.62■□□□□ 0.09
VRK3-217ENST00000599538 ZNF668Q96K58 619 aaPredicted RBP15.62■□□□□ 0.09
VRK3-217ENST00000599538 ANKFY1Q9P2R3 1169 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 AGO2Q9UKV8 859 aaKnown RBP15.62■□□□□ 0.09
VRK3-217ENST00000599538 STXBP5LQ9Y2K9 1186 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 DAAM1Q9Y4D1 1078 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 ATP8B3O60423 1300 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 SIP14410 1827 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 TARSL2A2RTX5 802 aaKnown RBP15.62■□□□□ 0.09
VRK3-217ENST00000599538 MAFO75444 373 aaPredicted RBP15.62■□□□□ 0.09
VRK3-217ENST00000599538 MMEP08473 750 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 C15orf39Q6ZRI6 1047 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.62■□□□□ 0.09
VRK3-217ENST00000599538 DAAM2Q86T65 1068 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 NT5DC3Q86UY8 548 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 METTL13Q8N6R0 699 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 RFFLQ8WZ73 363 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 SLC10A4Q96EP9 437 aa15.62■□□□□ 0.09
VRK3-217ENST00000599538 ZCCHC17Q9NP64 241 aaKnown RBP15.62■□□□□ 0.09
VRK3-217ENST00000599538 H0YCG3 227 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 FTLP02792 175 aaPredicted RBP15.61■□□□□ 0.09
VRK3-217ENST00000599538 GJB1P08034 283 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 RFC5P40937 340 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 MFAP3P55082 362 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 SNAPC2Q13487 334 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 CTNNBL1Q8WYA6 563 aaPredicted RBP15.61■□□□□ 0.09
VRK3-217ENST00000599538 SPATA33Q96N06 139 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 NT5C1BQ96P26 610 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 AZI2Q9H6S1 392 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 NCANO14594 1321 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 NOP56O00567 594 aaKnown RBP15.61■□□□□ 0.09
VRK3-217ENST00000599538 ADCY3O60266 1144 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 PIGRP01833 764 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 HARSP12081 509 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms