RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 PCDHA12Q9UN75 941 aa16.31■□□□□ 0.2
IRF3-223ENST00000599223 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
IRF3-223ENST00000599223 TTLL13PA6NNM8 815 aa16.3■□□□□ 0.2
IRF3-223ENST00000599223 GALR2O43603 387 aaPredicted RBP16.3■□□□□ 0.2
IRF3-223ENST00000599223 RFPL2O75678 378 aa16.3■□□□□ 0.2
IRF3-223ENST00000599223 SPATA31C1P0DKV0 1188 aa16.3■□□□□ 0.2
IRF3-223ENST00000599223 AXLP30530 894 aa16.3■□□□□ 0.2
IRF3-223ENST00000599223 TXKP42681 527 aa16.3■□□□□ 0.2
IRF3-223ENST00000599223 TFDP1Q14186 410 aa16.3■□□□□ 0.2
IRF3-223ENST00000599223 ANKRD1Q15327 319 aa16.3■□□□□ 0.2
IRF3-223ENST00000599223 NFKBIZQ9BYH8 718 aa16.3■□□□□ 0.2
IRF3-223ENST00000599223 BRMS1Q9HCU9 246 aa16.3■□□□□ 0.2
IRF3-223ENST00000599223 KLK14Q9P0G3 267 aa16.3■□□□□ 0.2
IRF3-223ENST00000599223 NPTXRO95502 500 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 EDN1P05305 212 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 ADH1AP07327 375 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 DSG1Q02413 1049 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 POU5F1BQ06416 359 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 PCBP1Q15365 356 aaKnown RBP eCLIP16.29■□□□□ 0.2
IRF3-223ENST00000599223 C15orf39Q6ZRI6 1047 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 MAEAQ7L5Y9 396 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 CMASQ8NFW8 434 aaPredicted RBP16.29■□□□□ 0.2
IRF3-223ENST00000599223 BSNDQ8WZ55 320 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 ATOH1Q92858 354 aaPredicted RBP16.29■□□□□ 0.2
IRF3-223ENST00000599223 ZNF707Q96C28 371 aaPredicted RBP16.29■□□□□ 0.2
IRF3-223ENST00000599223 PAAF1Q9BRP4 392 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 GPR62Q9BZJ7 368 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 CXCL16Q9H2A7 254 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 RXFP1Q9HBX9 757 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 UBN1Q9NPG3 1134 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 STK39Q9UEW8 545 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 TRIP11Q15643 1979 aa16.29■□□□□ 0.2
IRF3-223ENST00000599223 NARSO43776 548 aaKnown RBP16.28■□□□□ 0.2
IRF3-223ENST00000599223 GFRA3O60609 400 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 MED24O75448 989 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 GLUD1P00367 558 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 SPATA31D3P0C874 917 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 GUCY1B3Q02153 619 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 CDCA2Q69YH5 1023 aaPredicted RBP16.28■□□□□ 0.2
IRF3-223ENST00000599223 ASTLQ6HA08 431 aaPredicted RBP16.28■□□□□ 0.2
IRF3-223ENST00000599223 FUT10Q6P4F1 479 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 POTEGQ6S5H5 508 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 SPATA31D4Q6ZUB0 917 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 OTOP3Q7RTS5 596 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 CCDC43Q96MW1 224 aaKnown RBP16.28■□□□□ 0.2
IRF3-223ENST00000599223 TRIM6Q9C030 488 aaPredicted RBP16.28■□□□□ 0.2
IRF3-223ENST00000599223 KCNK12Q9HB15 430 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 CHST7Q9NS84 486 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 DUSP12Q9UNI6 340 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 USP20Q9Y2K6 914 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 GIT1Q9Y2X7 761 aa16.28■□□□□ 0.2
IRF3-223ENST00000599223 RIF1Q5UIP0 2472 aaKnown RBP16.28■□□□□ 0.2
IRF3-223ENST00000599223 CLUHO75153 1309 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 FAM186AA6NE01 2351 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 CCDC195A0A1B0GUA6 201 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 A0A1B0GUA9 196 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 LRRIQ4A6NIV6 560 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 NPR3P17342 541 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 RPL17P18621 184 aaKnown RBP16.27■□□□□ 0.2
IRF3-223ENST00000599223 MCM7P33993 719 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 GRIK3Q13003 919 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 TDGQ13569 410 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 SLC27A1Q6PCB7 646 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 CATSPER3Q86XQ3 398 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 GLYCTKQ8IVS8 523 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 RSAD2Q8WXG1 361 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 ACSF2Q96CM8 615 aaPredicted RBP16.27■□□□□ 0.2
IRF3-223ENST00000599223 MYADMQ96S97 322 aa16.27■□□□□ 0.2
IRF3-223ENST00000599223 MYH15Q9Y2K3 1946 aa16.27■□□□□ 0.19
IRF3-223ENST00000599223 COL4A3Q01955 1670 aa16.27■□□□□ 0.19
IRF3-223ENST00000599223 DCHS1Q96JQ0 3298 aa16.27■□□□□ 0.19
IRF3-223ENST00000599223 ZMYM2Q9UBW7 1377 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 PTGESO14684 152 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 TGM5O43548 720 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 PAPLNO95428 1278 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 ATP2B1P20020 1258 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 RTP2Q5QGT7 225 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 PALB2Q86YC2 1186 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 HASPINQ8TF76 798 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 MFSD1Q9H3U5 465 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 PDZD7Q9H5P4 517 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 WDR6Q9NNW5 1121 aaKnown RBP16.26■□□□□ 0.19
IRF3-223ENST00000599223 ADAM28Q9UKQ2 775 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 SPTBN4Q9H254 2564 aa16.26■□□□□ 0.19
IRF3-223ENST00000599223 CASTOR2A6NHX0 329 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 PI15O43692 258 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 KIF4AO95239 1232 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 SEC24BO95487 1268 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 NEK4P51957 841 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 NUBP1P53384 320 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 PRSS55Q6UWB4 352 aaPredicted RBP16.25■□□□□ 0.19
IRF3-223ENST00000599223 ASCL5Q7RTU5 278 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 FLCNQ8NFG4 579 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 RIN2Q8WYP3 895 aaPredicted RBP16.25■□□□□ 0.19
IRF3-223ENST00000599223 SMG7Q92540 1137 aaKnown RBP16.25■□□□□ 0.19
IRF3-223ENST00000599223 KIFC3Q9BVG8 833 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 COLEC11Q9BWP8 271 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 RHOBTB2Q9BYZ6 727 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms