RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 TRAIPQ9BWF2 469 aa22.03■■□□□ 1.12
IRF3-221ENST00000598808 CLSTN2Q9H4D0 955 aa22.03■■□□□ 1.12
IRF3-221ENST00000598808 HOOK1Q9UJC3 728 aaKnown RBP22.03■■□□□ 1.12
IRF3-221ENST00000598808 TNFSF13BQ9Y275 285 aa22.03■■□□□ 1.12
IRF3-221ENST00000598808 PCDHB13Q9Y5F0 798 aa22.03■■□□□ 1.12
IRF3-221ENST00000598808 MEIS3P2A8K0S8 358 aa22.02■■□□□ 1.12
IRF3-221ENST00000598808 CASP5P51878 434 aa22.02■■□□□ 1.12
IRF3-221ENST00000598808 SNW1Q13573 536 aaKnown RBP22.02■■□□□ 1.12
IRF3-221ENST00000598808 POSTNQ15063 836 aa22.02■■□□□ 1.12
IRF3-221ENST00000598808 CNNM4Q6P4Q7 775 aa22.02■■□□□ 1.12
IRF3-221ENST00000598808 RBM43Q6ZSC3 357 aaKnown RBP22.02■■□□□ 1.12
IRF3-221ENST00000598808 ZNF598Q86UK7 904 aaKnown RBP22.02■■□□□ 1.12
IRF3-221ENST00000598808 DEFB123Q8N688 67 aa22.02■■□□□ 1.12
IRF3-221ENST00000598808 SMG8Q8ND04 991 aaKnown RBP22.02■■□□□ 1.12
IRF3-221ENST00000598808 FGFBP2Q9BYJ0 223 aa22.02■■□□□ 1.12
IRF3-221ENST00000598808 RSAD1Q9HA92 442 aa22.02■■□□□ 1.12
IRF3-221ENST00000598808 EXOC7Q9UPT5 735 aa22.02■■□□□ 1.12
IRF3-221ENST00000598808 GDAQ9Y2T3 454 aa22.02■■□□□ 1.12
IRF3-221ENST00000598808 LINC01553A4QN01 128 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 RPN1P04843 607 aaKnown RBP22.01■■□□□ 1.11
IRF3-221ENST00000598808 MYL1P05976 194 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 AKAP5P24588 427 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 OSTNP61366 133 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 GTF2BQ00403 316 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 PNOCQ13519 176 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 ALCAMQ13740 583 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 CLLU1OSQ5K130 101 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 MPZL3Q6UWV2 235 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 MAP4K3Q8IVH8 894 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 CMTR2Q8IYT2 770 aaKnown RBP22.01■■□□□ 1.11
IRF3-221ENST00000598808 ENGASEQ8NFI3 743 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 URGCPQ8TCY9 931 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 HVCN1Q96D96 273 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 ACCSQ96QU6 501 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 TMEM117Q9H0C3 514 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 CDT1Q9H211 546 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 SLC39A2Q9NP94 309 aa22.01■■□□□ 1.11
IRF3-221ENST00000598808 PVALEFA0A1B0GWK0 134 aa22■■□□□ 1.11
IRF3-221ENST00000598808 TULP1O00294 542 aaPredicted RBP22■■□□□ 1.11
IRF3-221ENST00000598808 ZNF623O75123 536 aa22■■□□□ 1.11
IRF3-221ENST00000598808 TOM1L1O75674 476 aa22■■□□□ 1.11
IRF3-221ENST00000598808 PRPF6O94906 941 aaKnown RBP22■■□□□ 1.11
IRF3-221ENST00000598808 ARHGEF15O94989 841 aa22■■□□□ 1.11
IRF3-221ENST00000598808 RNASELQ05823 741 aaKnown RBP22■■□□□ 1.11
IRF3-221ENST00000598808 NOLC1Q14978 699 aaKnown RBP eCLIP22■■□□□ 1.11
IRF3-221ENST00000598808 KMT5BQ4FZB7 885 aa22■■□□□ 1.11
IRF3-221ENST00000598808 ZPBP2Q6X784 338 aa22■■□□□ 1.11
IRF3-221ENST00000598808 ZBTB45Q96K62 511 aaPredicted RBP22■■□□□ 1.11
IRF3-221ENST00000598808 RNF39Q9H2S5 420 aa22■■□□□ 1.11
IRF3-221ENST00000598808 ZNF576Q9H609 170 aa22■■□□□ 1.11
IRF3-221ENST00000598808 KLK14Q9P0G3 267 aa22■■□□□ 1.11
IRF3-221ENST00000598808 CLDN3O15551 220 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 MLH1P40692 756 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 TAP1Q03518 808 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 AGMOQ6ZNB7 445 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 THNSL1Q8IYQ7 743 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 CRIPAKQ8N1N5 446 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 LRRC43Q8N309 656 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 GLIS3Q8NEA6 775 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 ARNTL2Q8WYA1 636 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 ANP32BQ92688 251 aaKnown RBP21.99■■□□□ 1.11
IRF3-221ENST00000598808 ZNF689Q96CS4 500 aaPredicted RBP21.99■■□□□ 1.11
IRF3-221ENST00000598808 RPS6KC1Q96S38 1066 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 GBP3Q9H0R5 595 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 ST6GALNAC4Q9H4F1 302 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 RNF19AQ9NV58 838 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 MTMR10Q9NXD2 777 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 SNTG2Q9NY99 539 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 MRPL42Q9Y6G3 142 aaKnown RBP21.99■■□□□ 1.11
IRF3-221ENST00000598808 CHD9Q3L8U1 2897 aa21.99■■□□□ 1.11
IRF3-221ENST00000598808 CCDC192P0DO97 292 aa21.98■■□□□ 1.11
IRF3-221ENST00000598808 MCF2P10911 925 aa21.98■■□□□ 1.11
IRF3-221ENST00000598808 CTNNB1P35222 781 aa21.98■■□□□ 1.11
IRF3-221ENST00000598808 KCNA1Q09470 495 aa21.98■■□□□ 1.11
IRF3-221ENST00000598808 DPYDQ12882 1025 aa21.98■■□□□ 1.11
IRF3-221ENST00000598808 SPRED2Q7Z698 418 aa21.98■■□□□ 1.11
IRF3-221ENST00000598808 MRPL10Q7Z7H8 261 aaKnown RBP21.98■■□□□ 1.11
IRF3-221ENST00000598808 NELFCDQ8IXH7 590 aa21.98■■□□□ 1.11
IRF3-221ENST00000598808 SP7Q8TDD2 431 aaPredicted RBP21.98■■□□□ 1.11
IRF3-221ENST00000598808 NOC3LQ8WTT2 800 aaKnown RBP21.98■■□□□ 1.11
IRF3-221ENST00000598808 CASD1Q96PB1 797 aa21.98■■□□□ 1.11
IRF3-221ENST00000598808 TGS1Q96RS0 853 aaKnown RBP21.98■■□□□ 1.11
IRF3-221ENST00000598808 CCDC94Q9BW85 323 aaPredicted RBP21.98■■□□□ 1.11
IRF3-221ENST00000598808 MRPL9Q9BYD2 267 aaKnown RBP21.98■■□□□ 1.11
IRF3-221ENST00000598808 RC3H2Q9HBD1 1191 aaKnown RBP21.98■■□□□ 1.11
IRF3-221ENST00000598808 UBN1Q9NPG3 1134 aa21.98■■□□□ 1.11
IRF3-221ENST00000598808 FNDC1Q4ZHG4 1894 aaPredicted RBP21.98■■□□□ 1.11
IRF3-221ENST00000598808 KLRC4O43908 158 aa21.97■■□□□ 1.11
IRF3-221ENST00000598808 RECQL4O94761 1208 aa21.97■■□□□ 1.11
IRF3-221ENST00000598808 CAVIN2O95810 425 aa21.97■■□□□ 1.11
IRF3-221ENST00000598808 YARSP54577 528 aaKnown RBP21.97■■□□□ 1.11
IRF3-221ENST00000598808 NOMO2Q5JPE7 1267 aa21.97■■□□□ 1.11
IRF3-221ENST00000598808 ERCC4Q92889 916 aaPredicted RBP21.97■■□□□ 1.11
IRF3-221ENST00000598808 TIGD1Q96MW7 591 aa21.97■■□□□ 1.11
IRF3-221ENST00000598808 GAD1Q99259 594 aa21.97■■□□□ 1.11
IRF3-221ENST00000598808 C17orf80Q9BSJ5 609 aa21.97■■□□□ 1.11
IRF3-221ENST00000598808 MSTO1Q9BUK6 570 aa21.97■■□□□ 1.11
IRF3-221ENST00000598808 IKZF4Q9H2S9 585 aa21.97■■□□□ 1.11
IRF3-221ENST00000598808 HCSTQ9UBK5 93 aa21.97■■□□□ 1.11
IRF3-221ENST00000598808 TISP43B9A030 160 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms