RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 CES5AQ6NT32 575 aa25.4■■□□□ 1.66
SSBP4-205ENST00000598159 GSTCDQ8NEC7 633 aa25.4■■□□□ 1.66
SSBP4-205ENST00000598159 ADPGKQ9BRR6 497 aa25.4■■□□□ 1.66
SSBP4-205ENST00000598159 CCDC113Q9H0I3 377 aa25.4■■□□□ 1.66
SSBP4-205ENST00000598159 ADAM7Q9H2U9 754 aa25.4■■□□□ 1.66
SSBP4-205ENST00000598159 POLD4Q9HCU8 107 aa25.4■■□□□ 1.66
SSBP4-205ENST00000598159 MRPL17Q9NRX2 175 aaKnown RBP25.4■■□□□ 1.66
SSBP4-205ENST00000598159 PP2D1A8MPX8 630 aa25.39■■□□□ 1.66
SSBP4-205ENST00000598159 E9PMD0 336 aa25.39■■□□□ 1.66
SSBP4-205ENST00000598159 SOD2P04179 222 aa25.39■■□□□ 1.66
SSBP4-205ENST00000598159 PTPN14Q15678 1187 aa25.39■■□□□ 1.66
SSBP4-205ENST00000598159 HERC4Q5GLZ8 1057 aaPredicted RBP25.39■■□□□ 1.66
SSBP4-205ENST00000598159 ARL6IP4Q66PJ3 421 aaKnown RBP25.39■■□□□ 1.66
SSBP4-205ENST00000598159 SLC22A17Q8WUG5 538 aa25.39■■□□□ 1.66
SSBP4-205ENST00000598159 MMTAG2Q9BU76 263 aaKnown RBP25.39■■□□□ 1.66
SSBP4-205ENST00000598159 APOL5Q9BWW9 433 aa25.39■■□□□ 1.66
SSBP4-205ENST00000598159 PDZD7Q9H5P4 517 aa25.39■■□□□ 1.66
SSBP4-205ENST00000598159 DZANK1Q9NVP4 752 aa25.39■■□□□ 1.66
SSBP4-205ENST00000598159 PRG3Q9Y2Y8 225 aaPredicted RBP25.39■■□□□ 1.66
SSBP4-205ENST00000598159 FAM86C2PA6NEL3 165 aa25.38■■□□□ 1.65
SSBP4-205ENST00000598159 TTLL13PA6NNM8 815 aa25.38■■□□□ 1.65
SSBP4-205ENST00000598159 PRR33A8MZF0 331 aa25.38■■□□□ 1.65
SSBP4-205ENST00000598159 LILRB3O75022 631 aa25.38■■□□□ 1.65
SSBP4-205ENST00000598159 GRIK3Q13003 919 aa25.38■■□□□ 1.65
SSBP4-205ENST00000598159 RPGRIP1Q96KN7 1286 aa25.38■■□□□ 1.65
SSBP4-205ENST00000598159 KLHL5Q96PQ7 755 aa25.38■■□□□ 1.65
SSBP4-205ENST00000598159 RPS6KC1Q96S38 1066 aa25.38■■□□□ 1.65
SSBP4-205ENST00000598159 MARCH5Q9NX47 278 aa25.38■■□□□ 1.65
SSBP4-205ENST00000598159 KLK14Q9P0G3 267 aa25.38■■□□□ 1.65
SSBP4-205ENST00000598159 K7ERI5 159 aa25.37■■□□□ 1.65
SSBP4-205ENST00000598159 LIG1P18858 919 aa25.37■■□□□ 1.65
SSBP4-205ENST00000598159 HYIQ5T013 277 aa25.37■■□□□ 1.65
SSBP4-205ENST00000598159 RINT1Q6NUQ1 792 aa25.37■■□□□ 1.65
SSBP4-205ENST00000598159 NECTIN4Q96NY8 510 aa25.37■■□□□ 1.65
SSBP4-205ENST00000598159 HERC2P3Q9BVR0 1158 aa25.37■■□□□ 1.65
SSBP4-205ENST00000598159 NT5C3AQ9H0P0 336 aa25.37■■□□□ 1.65
SSBP4-205ENST00000598159 C17orf75Q9HAS0 396 aa25.37■■□□□ 1.65
SSBP4-205ENST00000598159 EFEMP2O95967 443 aa25.36■■□□□ 1.65
SSBP4-205ENST00000598159 SSBP05455 408 aaKnown RBP eCLIP25.36■■□□□ 1.65
SSBP4-205ENST00000598159 KLRC2P26717 231 aa25.36■■□□□ 1.65
SSBP4-205ENST00000598159 C1orf186Q6ZWK4 172 aa25.36■■□□□ 1.65
SSBP4-205ENST00000598159 APBB1IPQ7Z5R6 666 aaPredicted RBP25.36■■□□□ 1.65
SSBP4-205ENST00000598159 RNF168Q8IYW5 571 aaPredicted RBP25.36■■□□□ 1.65
SSBP4-205ENST00000598159 DRC1Q96MC2 740 aa25.36■■□□□ 1.65
SSBP4-205ENST00000598159 TIPINQ9BVW5 301 aa25.36■■□□□ 1.65
SSBP4-205ENST00000598159 MUTYHQ9UIF7 546 aa25.36■■□□□ 1.65
SSBP4-205ENST00000598159 KCNG1Q9UIX4 513 aa25.36■■□□□ 1.65
SSBP4-205ENST00000598159 C5orf42Q9H799 3197 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 VWA3AA6NCI4 1184 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 CCDC169A6NNP5 214 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 URODP06132 367 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 CNPP09543 421 aaKnown RBP25.35■■□□□ 1.65
SSBP4-205ENST00000598159 EPCAMP16422 314 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 MTHFRP42898 656 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 PEX3P56589 373 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 TAS1R1Q7RTX1 841 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 RIPOR3Q96MK2 946 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 KIFC3Q9BVG8 833 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 TMEM134Q9H6X4 195 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 SNTG2Q9NY99 539 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 RBM19Q9Y4C8 960 aaKnown RBP25.35■■□□□ 1.65
SSBP4-205ENST00000598159 PHLPP2Q6ZVD8 1323 aa25.35■■□□□ 1.65
SSBP4-205ENST00000598159 HIP1RO75146 1068 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 NPTX2P47972 431 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 CUL4AQ13619 759 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 ZRSR1Q15695 479 aaKnown RBP25.34■■□□□ 1.65
SSBP4-205ENST00000598159 DCAF4L1Q3SXM0 396 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 ATAT1Q5SQI0 421 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 NT5DC1Q5TFE4 455 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 ATF7IP2Q5U623 682 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 KIAA0319Q5VV43 1072 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 KCNK18Q7Z418 384 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 BRAPQ7Z569 592 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 CABP7Q86V35 215 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 USP20Q9Y2K6 914 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 NR2E1Q9Y466 385 aa25.34■■□□□ 1.65
SSBP4-205ENST00000598159 SLC26A4O43511 780 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 THP07101 528 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 GLUD2P49448 558 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 CLCN4P51793 760 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 DMP1Q13316 513 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-205ENST00000598159 TUSC3Q13454 348 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 RARS2Q5T160 578 aaKnown RBP25.33■■□□□ 1.65
SSBP4-205ENST00000598159 KIAA1841Q6NSI8 718 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 GPR65Q8IYL9 337 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 DAW1Q8N136 415 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 SYT2Q8N9I0 419 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-205ENST00000598159 EDAQ92838 391 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 CDK5RAP3Q96JB5 506 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 AK8Q96MA6 479 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 FBXL18Q96ME1 805 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 NTPCRQ9BSD7 190 aaKnown RBP25.33■■□□□ 1.65
SSBP4-205ENST00000598159 KMT5AQ9NQR1 393 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 CHST7Q9NS84 486 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 RAPGEFL1Q9UHV5 662 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 ADAM28Q9UKQ2 775 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 TNFSF13BQ9Y275 285 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 HCN4Q9Y3Q4 1203 aa25.33■■□□□ 1.65
SSBP4-205ENST00000598159 ARIH1Q9Y4X5 557 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-205ENST00000598159 C2CD2LO14523 706 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms