RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 GLB1LQ6UWU2 654 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 ABI1Q8IZP0 508 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 FIBCD1Q8N539 461 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 CLP1Q92989 425 aaKnown RBP22.27■■□□□ 1.16
PNKP-211ENST00000598020 RNF39Q9H2S5 420 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 NXF3Q9H4D5 531 aaKnown RBP22.27■■□□□ 1.16
PNKP-211ENST00000598020 RSAD1Q9HA92 442 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 EXOC7Q9UPT5 735 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 GIT1Q9Y2X7 761 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 HES2Q9Y543 173 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 STYXL1Q9Y6J8 313 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 LAMA2P24043 3122 aaKnown RBP22.26■■□□□ 1.15
PNKP-211ENST00000598020 TBKBP1A7MCY6 615 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 HNRNPDLO14979 420 aaKnown RBP22.26■■□□□ 1.15
PNKP-211ENST00000598020 KINO60870 393 aaKnown RBP22.26■■□□□ 1.15
PNKP-211ENST00000598020 LINC00271P0C7V0 271 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 LIG4P49917 911 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 KCNB1Q14721 858 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 ZNF568Q3ZCX4 644 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 PPP2R2DQ66LE6 453 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 ZNF507Q8TCN5 953 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 HELQQ8TDG4 1101 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 HPS3Q969F9 1004 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 BICD1Q96G01 975 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 ZBTB45Q96K62 511 aaPredicted RBP22.26■■□□□ 1.15
PNKP-211ENST00000598020 TCHPQ9BT92 498 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 MRPL9Q9BYD2 267 aaKnown RBP22.26■■□□□ 1.15
PNKP-211ENST00000598020 ZNF576Q9H609 170 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 TMEM206Q9H813 350 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 LMBRD1Q9NUN5 540 aa22.26■■□□□ 1.15
PNKP-211ENST00000598020 HOOK1Q9UJC3 728 aaKnown RBP22.26■■□□□ 1.15
PNKP-211ENST00000598020 MYO9BQ13459 2157 aa22.25■■□□□ 1.15
PNKP-211ENST00000598020 CLDN3O15551 220 aa22.25■■□□□ 1.15
PNKP-211ENST00000598020 RHOBTB3O94955 611 aa22.25■■□□□ 1.15
PNKP-211ENST00000598020 GRM5P41594 1212 aa22.25■■□□□ 1.15
PNKP-211ENST00000598020 ERVK-21P61565 698 aa22.25■■□□□ 1.15
PNKP-211ENST00000598020 KCNA1Q09470 495 aa22.25■■□□□ 1.15
PNKP-211ENST00000598020 NOLC1Q14978 699 aaKnown RBP eCLIP22.25■■□□□ 1.15
PNKP-211ENST00000598020 ZNF697Q5TEC3 545 aa22.25■■□□□ 1.15
PNKP-211ENST00000598020 SLC39A4Q6P5W5 647 aa22.25■■□□□ 1.15
PNKP-211ENST00000598020 SPATA20Q8TB22 786 aa22.25■■□□□ 1.15
PNKP-211ENST00000598020 CCDC47Q96A33 483 aaKnown RBP22.25■■□□□ 1.15
PNKP-211ENST00000598020 SAMD11Q96NU1 681 aa22.25■■□□□ 1.15
PNKP-211ENST00000598020 TTYH1Q9H313 450 aaPredicted RBP22.25■■□□□ 1.15
PNKP-211ENST00000598020 EXOC1Q9NV70 894 aa22.25■■□□□ 1.15
PNKP-211ENST00000598020 UBE4BO95155 1302 aa22.25■■□□□ 1.15
PNKP-211ENST00000598020 PRPF6O94906 941 aaKnown RBP22.24■■□□□ 1.15
PNKP-211ENST00000598020 PNOCQ13519 176 aa22.24■■□□□ 1.15
PNKP-211ENST00000598020 BMT2Q1RMZ1 405 aa22.24■■□□□ 1.15
PNKP-211ENST00000598020 PAN2Q504Q3 1202 aaKnown RBP22.24■■□□□ 1.15
PNKP-211ENST00000598020 NOMO2Q5JPE7 1267 aa22.24■■□□□ 1.15
PNKP-211ENST00000598020 SLFN12LQ6IEE8 588 aa22.24■■□□□ 1.15
PNKP-211ENST00000598020 LRRC43Q8N309 656 aa22.24■■□□□ 1.15
PNKP-211ENST00000598020 GLIS3Q8NEA6 775 aa22.24■■□□□ 1.15
PNKP-211ENST00000598020 TGS1Q96RS0 853 aaKnown RBP22.24■■□□□ 1.15
PNKP-211ENST00000598020 SEMA6BQ9H3T3 888 aa22.24■■□□□ 1.15
PNKP-211ENST00000598020 KANSL3Q9P2N6 904 aa22.24■■□□□ 1.15
PNKP-211ENST00000598020 RWDD3Q9Y3V2 267 aa22.24■■□□□ 1.15
PNKP-211ENST00000598020 MRPL42Q9Y6G3 142 aaKnown RBP22.24■■□□□ 1.15
PNKP-211ENST00000598020 RALGAPA2Q2PPJ7 1873 aa22.24■■□□□ 1.15
PNKP-211ENST00000598020 A0A0B4J269 797 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 ANKRD63C9JTQ0 380 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 GOLGA6L22H0YM25 854 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 AKAP5P24588 427 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 STK4Q13043 487 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 KYAT1Q16773 422 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 LRRC55Q6ZSA7 311 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 ZBTB33Q86T24 672 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 SCFD1Q8WVM8 642 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 GSDMAQ96QA5 445 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 HAPLN2Q9GZV7 340 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 CWH43Q9H720 699 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 SLC39A2Q9NP94 309 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 TYW1Q9NV66 732 aaKnown RBP22.23■■□□□ 1.15
PNKP-211ENST00000598020 SNTG2Q9NY99 539 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 ANKFY1Q9P2R3 1169 aa22.23■■□□□ 1.15
PNKP-211ENST00000598020 NLRC5Q86WI3 1866 aa22.22■■□□□ 1.15
PNKP-211ENST00000598020 ARL5CA6NH57 179 aa22.22■■□□□ 1.15
PNKP-211ENST00000598020 SMC2O95347 1197 aa22.22■■□□□ 1.15
PNKP-211ENST00000598020 HOXD13P35453 343 aa22.22■■□□□ 1.15
PNKP-211ENST00000598020 KIAA0895Q8NCT3 520 aa22.22■■□□□ 1.15
PNKP-211ENST00000598020 GSTCDQ8NEC7 633 aa22.22■■□□□ 1.15
PNKP-211ENST00000598020 URGCPQ8TCY9 931 aa22.22■■□□□ 1.15
PNKP-211ENST00000598020 GAD1Q99259 594 aa22.22■■□□□ 1.15
PNKP-211ENST00000598020 CCDC94Q9BW85 323 aaPredicted RBP22.22■■□□□ 1.15
PNKP-211ENST00000598020 APOL6Q9BWW8 343 aa22.22■■□□□ 1.15
PNKP-211ENST00000598020 TBC1D13Q9NVG8 400 aa22.22■■□□□ 1.15
PNKP-211ENST00000598020 PARP2Q9UGN5 583 aa22.22■■□□□ 1.15
PNKP-211ENST00000598020 C5orf67F2Z3F1 127 aa22.21■■□□□ 1.15
PNKP-211ENST00000598020 FAM189A1O60320 539 aa22.21■■□□□ 1.15
PNKP-211ENST00000598020 RECQL4O94761 1208 aa22.21■■□□□ 1.15
PNKP-211ENST00000598020 RB1P06400 928 aa22.21■■□□□ 1.15
PNKP-211ENST00000598020 ADSSP30520 456 aa22.21■■□□□ 1.15
PNKP-211ENST00000598020 BMPR1AP36894 532 aa22.21■■□□□ 1.15
PNKP-211ENST00000598020 SNRPFP62306 86 aaKnown RBP22.21■■□□□ 1.15
PNKP-211ENST00000598020 TMEM192Q8IY95 271 aa22.21■■□□□ 1.15
PNKP-211ENST00000598020 SYCP3Q8IZU3 236 aa22.21■■□□□ 1.15
PNKP-211ENST00000598020 CEP120Q8N960 986 aa22.21■■□□□ 1.15
PNKP-211ENST00000598020 ACAP3Q96P50 834 aa22.21■■□□□ 1.15
PNKP-211ENST00000598020 PLVAPQ9BX97 442 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms