RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 CASP1P29466 404 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 PBX3P40426 434 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 OSTNP61366 133 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 ASIC1P78348 528 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 AMPD3Q01432 767 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 ZC2HC1CQ53FD0 456 aaPredicted RBP12.17□□□□□ -0.46
LIG1-211ENST00000596457 HERC4Q5GLZ8 1057 aaPredicted RBP12.17□□□□□ -0.46
LIG1-211ENST00000596457 NOMO2Q5JPE7 1267 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 THNSL1Q8IYQ7 743 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 GRAMD1CQ8IYS0 662 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 COLGALT1Q8NBJ5 622 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 DNAJC19Q96DA6 116 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 ZBTB45Q96K62 511 aaPredicted RBP12.17□□□□□ -0.46
LIG1-211ENST00000596457 FAM193BQ96PV7 902 aaPredicted RBP12.17□□□□□ -0.46
LIG1-211ENST00000596457 ACO2Q99798 780 aaKnown RBP12.17□□□□□ -0.46
LIG1-211ENST00000596457 BLZF1Q9H2G9 400 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 CUEDC2Q9H467 287 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 CWH43Q9H720 699 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 MRPL44Q9H9J2 332 aaKnown RBP12.17□□□□□ -0.46
LIG1-211ENST00000596457 ALG13Q9NP73 1137 aaKnown RBP12.17□□□□□ -0.46
LIG1-211ENST00000596457 AAASQ9NRG9 546 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 CHMP5Q9NZZ3 219 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 CIZ1Q9ULV3 898 aaPredicted RBP12.17□□□□□ -0.46
LIG1-211ENST00000596457 PCDHB12Q9Y5F1 795 aa12.17□□□□□ -0.46
LIG1-211ENST00000596457 NT5C1B-RDH14C9J2C7 533 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 TULP1O00294 542 aaPredicted RBP12.16□□□□□ -0.46
LIG1-211ENST00000596457 ZC3H11AO75152 810 aaKnown RBP eCLIP12.16□□□□□ -0.46
LIG1-211ENST00000596457 MLH1P40692 756 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 SYKP43405 635 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 AFF1P51825 1210 aaKnown RBP12.16□□□□□ -0.46
LIG1-211ENST00000596457 ZNF131P52739 623 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 AAK1Q2M2I8 961 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 ZNF568Q3ZCX4 644 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 APBB1IPQ7Z5R6 666 aaPredicted RBP12.16□□□□□ -0.46
LIG1-211ENST00000596457 CCDC65Q8IXS2 484 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 LRRC43Q8N309 656 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 KLHL23Q8NBE8 558 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 CLP1Q92989 425 aaKnown RBP12.16□□□□□ -0.46
LIG1-211ENST00000596457 GAD1Q99259 594 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 PYM1Q9BRP8 204 aaKnown RBP12.16□□□□□ -0.46
LIG1-211ENST00000596457 MRPL9Q9BYD2 267 aaKnown RBP12.16□□□□□ -0.46
LIG1-211ENST00000596457 TNMDQ9H2S6 317 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 UBN1Q9NPG3 1134 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 TBC1D13Q9NVG8 400 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 MIOSQ9NXC5 875 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 ANKFY1Q9P2R3 1169 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 THEGQ9P2T0 379 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 TBX20Q9UMR3 447 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 TNFSF13BQ9Y275 285 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 NCOR1O75376 2440 aa12.16□□□□□ -0.46
LIG1-211ENST00000596457 ARL5CA6NH57 179 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 H3BNC9 293 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 GRM6O15303 877 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 LPXNO60711 386 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 GCNT3O95395 438 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 RB1P06400 928 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 LINC00271P0C7V0 271 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 GAP43P17677 238 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 LAG3P18627 525 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 LIG4P49917 911 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 SCNN1GP51170 649 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 NDUFA8P51970 172 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 MRPS5P82675 430 aaKnown RBP12.15□□□□□ -0.46
LIG1-211ENST00000596457 COASYQ13057 564 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 DCAF4L1Q3SXM0 396 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 SEZ6Q53EL9 994 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 KCNT2Q6UVM3 1135 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 ZNF280BQ86YH2 543 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 MRPS27Q92552 414 aaKnown RBP12.15□□□□□ -0.46
LIG1-211ENST00000596457 ZFP42Q96MM3 310 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 ZNF558Q96NG5 402 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 RPS6KC1Q96S38 1066 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 C11orf84Q9BUA3 381 aaPredicted RBP12.15□□□□□ -0.46
LIG1-211ENST00000596457 GOLPH3LQ9H4A5 285 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 NRDE2Q9H7Z3 1164 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 KBTBD4Q9NVX7 518 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 GIT1Q9Y2X7 761 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 ARIH1Q9Y4X5 557 aaPredicted RBP12.15□□□□□ -0.46
LIG1-211ENST00000596457 MTCH2Q9Y6C9 303 aa12.15□□□□□ -0.46
LIG1-211ENST00000596457 TRIP11Q15643 1979 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 A0A1W2PQ27 194 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 A0A1W2PQ64 194 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 A0A1W2PQD8 194 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 C5orf67F2Z3F1 127 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 ACTN4O43707 911 aaKnown RBP12.14□□□□□ -0.47
LIG1-211ENST00000596457 DDHD2O94830 711 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 ITGB1P05556 798 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 SLFN14P0C7P3 912 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 MYBP10242 640 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 CA8P35219 290 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 ALDH7A1P49419 539 aaKnown RBP12.14□□□□□ -0.47
LIG1-211ENST00000596457 BCAR1P56945 870 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 CUL4BQ13620 913 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 SKIV2LQ15477 1246 aaKnown RBP12.14□□□□□ -0.47
LIG1-211ENST00000596457 PTPROQ16827 1216 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 MPZL3Q6UWV2 235 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 ZNF720Q7Z2F6 126 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 CEP120Q8N960 986 aa12.14□□□□□ -0.47
LIG1-211ENST00000596457 HPS3Q969F9 1004 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms