RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 GUCY1B3Q02153 619 aa17.86■□□□□ 0.45
LIM2-202ENST00000596399 GLYCTKQ8IVS8 523 aa17.86■□□□□ 0.45
LIM2-202ENST00000596399 PLCD3Q8N3E9 789 aa17.86■□□□□ 0.45
LIM2-202ENST00000596399 GPR62Q9BZJ7 368 aa17.86■□□□□ 0.45
LIM2-202ENST00000596399 CXCL16Q9H2A7 254 aa17.86■□□□□ 0.45
LIM2-202ENST00000596399 USP20Q9Y2K6 914 aa17.86■□□□□ 0.45
LIM2-202ENST00000596399 ZFHX2Q9C0A1 2572 aaPredicted RBP17.86■□□□□ 0.45
LIM2-202ENST00000596399 CCDC195A0A1B0GUA6 201 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 MED24O75448 989 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 RPL17P18621 184 aaKnown RBP17.85■□□□□ 0.45
LIM2-202ENST00000596399 MCM7P33993 719 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 GLUD2P49448 558 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 NEK4P51957 841 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 POU5F1BQ06416 359 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 NCBP1Q09161 790 aaKnown RBP17.85■□□□□ 0.45
LIM2-202ENST00000596399 CCDC149Q6ZUS6 474 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 PALB2Q86YC2 1186 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 RSAD2Q8WXG1 361 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 ACSF2Q96CM8 615 aaPredicted RBP17.85■□□□□ 0.45
LIM2-202ENST00000596399 CCDC51Q96ER9 411 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 CCDC43Q96MW1 224 aaKnown RBP17.85■□□□□ 0.45
LIM2-202ENST00000596399 PAAF1Q9BRP4 392 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 TRIM6Q9C030 488 aaPredicted RBP17.85■□□□□ 0.45
LIM2-202ENST00000596399 GIT1Q9Y2X7 761 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 CFAP54Q96N23 3096 aa17.85■□□□□ 0.45
LIM2-202ENST00000596399 LRRIQ4A6NIV6 560 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 GALR2O43603 387 aaPredicted RBP17.84■□□□□ 0.45
LIM2-202ENST00000596399 NARSO43776 548 aaKnown RBP17.84■□□□□ 0.45
LIM2-202ENST00000596399 SEC24BO95487 1268 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 DSG1Q02413 1049 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 PCBP1Q15365 356 aaKnown RBP eCLIP17.84■□□□□ 0.45
LIM2-202ENST00000596399 SLC27A1Q6PCB7 646 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 OTOP3Q7RTS5 596 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 CATSPER3Q86XQ3 398 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 ST13P5Q8NFI4 369 aaPredicted RBP17.84■□□□□ 0.45
LIM2-202ENST00000596399 KCNK12Q9HB15 430 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 RXFP1Q9HBX9 757 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 POLD4Q9HCU8 107 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 CHST7Q9NS84 486 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 STK39Q9UEW8 545 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 PARP2Q9UGN5 583 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 VPS13AQ96RL7 3174 aa17.84■□□□□ 0.45
LIM2-202ENST00000596399 TDRD15B5MCY1 1934 aaKnown RBP17.84■□□□□ 0.45
LIM2-202ENST00000596399 A0A1B0GUA9 196 aa17.83■□□□□ 0.44
LIM2-202ENST00000596399 PI15O43692 258 aa17.83■□□□□ 0.44
LIM2-202ENST00000596399 ADH1AP07327 375 aa17.83■□□□□ 0.44
LIM2-202ENST00000596399 ASTLQ6HA08 431 aaPredicted RBP17.83■□□□□ 0.44
LIM2-202ENST00000596399 POTEGQ6S5H5 508 aa17.83■□□□□ 0.44
LIM2-202ENST00000596399 C15orf39Q6ZRI6 1047 aa17.83■□□□□ 0.44
LIM2-202ENST00000596399 FLCNQ8NFG4 579 aa17.83■□□□□ 0.44
LIM2-202ENST00000596399 BSNDQ8WZ55 320 aa17.83■□□□□ 0.44
LIM2-202ENST00000596399 COLEC11Q9BWP8 271 aa17.83■□□□□ 0.44
LIM2-202ENST00000596399 NFKBIZQ9BYH8 718 aa17.83■□□□□ 0.44
LIM2-202ENST00000596399 MFSD1Q9H3U5 465 aa17.83■□□□□ 0.44
LIM2-202ENST00000596399 GFRA3O60609 400 aa17.82■□□□□ 0.44
LIM2-202ENST00000596399 GLUD1P00367 558 aa17.82■□□□□ 0.44
LIM2-202ENST00000596399 EDN1P05305 212 aa17.82■□□□□ 0.44
LIM2-202ENST00000596399 NPR3P17342 541 aa17.82■□□□□ 0.44
LIM2-202ENST00000596399 TDGQ13569 410 aa17.82■□□□□ 0.44
LIM2-202ENST00000596399 TRIM29Q14134 588 aa17.82■□□□□ 0.44
LIM2-202ENST00000596399 CWF19L1Q69YN2 538 aaKnown RBP17.82■□□□□ 0.44
LIM2-202ENST00000596399 FUT10Q6P4F1 479 aa17.82■□□□□ 0.44
LIM2-202ENST00000596399 HASPINQ8TF76 798 aa17.82■□□□□ 0.44
LIM2-202ENST00000596399 RIN2Q8WYP3 895 aaPredicted RBP17.82■□□□□ 0.44
LIM2-202ENST00000596399 ZNF707Q96C28 371 aaPredicted RBP17.82■□□□□ 0.44
LIM2-202ENST00000596399 ADAM28Q9UKQ2 775 aa17.82■□□□□ 0.44
LIM2-202ENST00000596399 CACNA1HO95180 2353 aa17.82■□□□□ 0.44
LIM2-202ENST00000596399 TGM5O43548 720 aa17.81■□□□□ 0.44
LIM2-202ENST00000596399 NR1I2O75469 434 aa17.81■□□□□ 0.44
LIM2-202ENST00000596399 GBP2P32456 591 aaPredicted RBP17.81■□□□□ 0.44
LIM2-202ENST00000596399 ZNF174Q15697 407 aa17.81■□□□□ 0.44
LIM2-202ENST00000596399 PRSS55Q6UWB4 352 aaPredicted RBP17.81■□□□□ 0.44
LIM2-202ENST00000596399 CMASQ8NFW8 434 aaPredicted RBP17.81■□□□□ 0.44
LIM2-202ENST00000596399 SMG7Q92540 1137 aaKnown RBP17.81■□□□□ 0.44
LIM2-202ENST00000596399 MYADMQ96S97 322 aa17.81■□□□□ 0.44
LIM2-202ENST00000596399 PDZD7Q9H5P4 517 aa17.81■□□□□ 0.44
LIM2-202ENST00000596399 WDR6Q9NNW5 1121 aaKnown RBP17.81■□□□□ 0.44
LIM2-202ENST00000596399 SNTG2Q9NY99 539 aa17.81■□□□□ 0.44
LIM2-202ENST00000596399 SSX2IPQ9Y2D8 614 aa17.81■□□□□ 0.44
LIM2-202ENST00000596399 CLUHO75153 1309 aa17.8■□□□□ 0.44
LIM2-202ENST00000596399 CASTOR2A6NHX0 329 aa17.8■□□□□ 0.44
LIM2-202ENST00000596399 NEFLP07196 543 aa17.8■□□□□ 0.44
LIM2-202ENST00000596399 XRCC6P12956 609 aaKnown RBP eCLIP17.8■□□□□ 0.44
LIM2-202ENST00000596399 LIG1P18858 919 aa17.8■□□□□ 0.44
LIM2-202ENST00000596399 IGFBP6P24592 240 aaPredicted RBP17.8■□□□□ 0.44
LIM2-202ENST00000596399 GRIK3Q13003 919 aa17.8■□□□□ 0.44
LIM2-202ENST00000596399 ECM1Q16610 540 aa17.8■□□□□ 0.44
LIM2-202ENST00000596399 RTP2Q5QGT7 225 aa17.8■□□□□ 0.44
LIM2-202ENST00000596399 CDCA2Q69YH5 1023 aaPredicted RBP17.8■□□□□ 0.44
LIM2-202ENST00000596399 LILRA6Q6PI73 481 aa17.8■□□□□ 0.44
LIM2-202ENST00000596399 SIX5Q8N196 739 aa17.8■□□□□ 0.44
LIM2-202ENST00000596399 NT5C3AQ9H0P0 336 aa17.8■□□□□ 0.44
LIM2-202ENST00000596399 FZD8Q9H461 694 aa17.8■□□□□ 0.44
LIM2-202ENST00000596399 DUSP12Q9UNI6 340 aa17.8■□□□□ 0.44
LIM2-202ENST00000596399 PTGESO14684 152 aa17.79■□□□□ 0.44
LIM2-202ENST00000596399 TADA2AO75478 443 aa17.79■□□□□ 0.44
LIM2-202ENST00000596399 KIF4AO95239 1232 aa17.79■□□□□ 0.44
LIM2-202ENST00000596399 CFHP08603 1231 aa17.79■□□□□ 0.44
LIM2-202ENST00000596399 USP41Q3LFD5 358 aa17.79■□□□□ 0.44
LIM2-202ENST00000596399 PPP4R3CPQ6ZMV5 832 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms