RNA–Protein interactions for RNA: ENST00000595984.5

COPE-205, Transcript of coatomer protein complex subunit epsilon, human

TSL 3

Gene COPE, Length 434 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPE-205	ENST00000595984	ACTN4	O43707	911 aa	Known RBP	13.42	□□□□□ -0.26
COPE-205	ENST00000595984	B4GALT3	O60512	393 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	ITGB1	P05556	798 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	GAP43	P17677	238 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	LAG3	P18627	525 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	POU3F3	P20264	500 aa	Predicted RBP	13.42	□□□□□ -0.26
COPE-205	ENST00000595984	CASP1	P29466	404 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	PBX3	P40426	434 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	MLH1	P40692	756 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	NDUFA8	P51970	172 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	GTF2B	Q00403	316 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	AMPD3	Q01432	767 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	ZNF568	Q3ZCX4	644 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.42	□□□□□ -0.26
COPE-205	ENST00000595984	ZBTB33	Q86T24	672 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	GRAMD1C	Q8IYS0	662 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	HACE1	Q8IYU2	909 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	FSIP1	Q8NA03	581 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	KLHL23	Q8NBE8	558 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	URGCP	Q8TCY9	931 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	RSPH1	Q8WYR4	309 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	P2RX5	Q93086	422 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	ZBTB45	Q96K62	511 aa	Predicted RBP	13.42	□□□□□ -0.26
COPE-205	ENST00000595984	ZFP42	Q96MM3	310 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	GAD1	Q99259	594 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	C7orf25	Q9BPX7	421 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	PYM1	Q9BRP8	204 aa	Known RBP	13.42	□□□□□ -0.26
COPE-205	ENST00000595984	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.42	□□□□□ -0.26
COPE-205	ENST00000595984	LRRC27	Q9C0I9	530 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	CDT1	Q9H211	546 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	ST6GALNAC4	Q9H4F1	302 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	NRDE2	Q9H7Z3	1164 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	AAAS	Q9NRG9	546 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	PANK4	Q9NVE7	773 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	SNTG2	Q9NY99	539 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	CHMP5	Q9NZZ3	219 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	KLK14	Q9P0G3	267 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	TBC1D7	Q9P0N9	293 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	SEL1L	Q9UBV2	794 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	PARP2	Q9UGN5	583 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	GIT1	Q9Y2X7	761 aa		13.42	□□□□□ -0.26
COPE-205	ENST00000595984	DDHD2	O94830	711 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	POMC	P01189	267 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	SLFN14	P0C7P3	912 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	SCP2	P22307	547 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	AFM	P43652	599 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	SCNN1G	P51170	649 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	ASIC1	P78348	528 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	RNASEL	Q05823	741 aa	Known RBP	13.41	□□□□□ -0.26
COPE-205	ENST00000595984	COASY	Q13057	564 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.41	□□□□□ -0.26
COPE-205	ENST00000595984	CNNM4	Q6P4Q7	775 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	KCNT2	Q6UVM3	1135 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	MPZL3	Q6UWV2	235 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	ZPBP2	Q6X784	338 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	ZNF720	Q7Z2F6	126 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	ZNF280B	Q86YH2	543 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	CCDC65	Q8IXS2	484 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	CEP57L1	Q8IYX8	460 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	CEP120	Q8N960	986 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	GSTCD	Q8NEC7	633 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	MAFA	Q8NHW3	353 aa	Predicted RBP	13.41	□□□□□ -0.26
COPE-205	ENST00000595984	MRPS27	Q92552	414 aa	Known RBP	13.41	□□□□□ -0.26
COPE-205	ENST00000595984	ZNF558	Q96NG5	402 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	STRA6	Q9BX79	667 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	FGFBP2	Q9BYJ0	223 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	HAPLN2	Q9GZV7	340 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	GBP3	Q9H0R5	595 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	CXCL16	Q9H2A7	254 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	BLZF1	Q9H2G9	400 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	MRPL44	Q9H9J2	332 aa	Known RBP	13.41	□□□□□ -0.26
COPE-205	ENST00000595984	ALG13	Q9NP73	1137 aa	Known RBP	13.41	□□□□□ -0.26
COPE-205	ENST00000595984	DNAJB4	Q9UDY4	337 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	PLAGL2	Q9UPG8	496 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	GDA	Q9Y2T3	454 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	PCDHB12	Q9Y5F1	795 aa		13.41	□□□□□ -0.26
COPE-205	ENST00000595984	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.41	□□□□□ -0.26
COPE-205	ENST00000595984	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.4	□□□□□ -0.26
COPE-205	ENST00000595984	NT5C1B-RDH14	C9J2C7	533 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	GTPBP6	O43824	516 aa	Predicted RBP	13.4	□□□□□ -0.26
COPE-205	ENST00000595984	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
COPE-205	ENST00000595984	TOM1L1	O75674	476 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	PPP1R37	O75864	691 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	RECQL4	O94761	1208 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	PIGR	P01833	764 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	MYB	P10242	640 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	MCF2	P10911	925 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	HARS	P12081	509 aa	Known RBP	13.4	□□□□□ -0.26
COPE-205	ENST00000595984	DNAJB1	P25685	340 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	GRM5	P41594	1212 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	SYK	P43405	635 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	CASP5	P51878	434 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	BCAR1	P56945	870 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	CUL4B	Q13620	913 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	SLC39A4	Q6P5W5	647 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.4	□□□□□ -0.26
COPE-205	ENST00000595984	MAP4K3	Q8IVH8	894 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	THNSL1	Q8IYQ7	743 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	MICALL1	Q8N3F8	863 aa		13.4	□□□□□ -0.26
COPE-205	ENST00000595984	SPPL3	Q8TCT6	385 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 225.8 ms