RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 GAP43P17677 238 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 SYKP43405 635 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 CASP5P51878 434 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 ASIC1P78348 528 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 COASYQ13057 564 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 GPM6BQ13491 265 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 CUL4BQ13620 913 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 ZNF568Q3ZCX4 644 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 COLGALT1Q8NBJ5 622 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 CNNM3Q8NE01 707 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 SAMD11Q96NU1 681 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 ADPGKQ9BRR6 497 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 HAPLN2Q9GZV7 340 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 GBP3Q9H0R5 595 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 MRPL44Q9H9J2 332 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 ANKFY1Q9P2R3 1169 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 PARP2Q9UGN5 583 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 TBX20Q9UMR3 447 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 TNFSF13BQ9Y275 285 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 GDAQ9Y2T3 454 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 MYO7AQ13402 2215 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 ARL5CA6NH57 179 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 TISP43B9A030 160 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 C5orf67F2Z3F1 127 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 H0YCG3 227 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 H3BNC9 293 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 GRM6O15303 877 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 RECQL4O94761 1208 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 MYBP10242 640 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 PROZP22891 400 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 SCNN1GP51170 649 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 OSTNP61366 133 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 GTF2BQ00403 316 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 SEZ6Q53EL9 994 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 HERC4Q5GLZ8 1057 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 SLC39A4Q6P5W5 647 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 ZNF280BQ86YH2 543 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 CEP57L1Q8IYX8 460 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 MICALL1Q8N3F8 863 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 KLHL23Q8NBE8 558 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 GLIS3Q8NEA6 775 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 BICD1Q96G01 975 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 PAGE5Q96GU1 130 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 C7orf25Q9BPX7 421 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 NRDE2Q9H7Z3 1164 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 MAGEF1Q9HAY2 307 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 ALG13Q9NP73 1137 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 DNAJB4Q9UDY4 337 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 KCNG1Q9UIX4 513 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 STXBP5LQ9Y2K9 1186 aa15.12■□□□□ 0.01
SHKBP1-207ENST00000595631 NT5C1B-RDH14C9J2C7 533 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 ANKRD63C9JTQ0 380 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 ZC3H11AO75152 810 aaKnown RBP eCLIP15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 PPP1R37O75864 691 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 DDHD2O94830 711 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 GCNT3O95395 438 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 ITGB1P05556 798 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 SLFN14P0C7P3 912 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 PRR29P0C7W0 189 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 AMPD3Q01432 767 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 KCNA1Q09470 495 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 DCAF4L1Q3SXM0 396 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 MPZL3Q6UWV2 235 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 ZNF720Q7Z2F6 126 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 CCDC65Q8IXS2 484 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 HACE1Q8IYU2 909 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 GSTCDQ8NEC7 633 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 URGCPQ8TCY9 931 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 KCNN1Q92952 543 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 TCHPQ9BT92 498 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 STRA6Q9BX79 667 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 MRPL9Q9BYD2 267 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 LRRC27Q9C0I9 530 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 SEL1LQ9UBV2 794 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 PLAGL2Q9UPG8 496 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 RWDD3Q9Y3V2 267 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 MTCH2Q9Y6C9 303 aa15.11■□□□□ 0.01
SHKBP1-207ENST00000595631 HNRNPDLO14979 420 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 GADD45BO75293 160 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 SLC34A2O95436 690 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 RB1P06400 928 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 LAG3P18627 525 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 DNAJB1P25685 340 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 MATR3P43243 847 aaKnown RBP eCLIP15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 LIG4P49917 911 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 BCAR1P56945 870 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 RNASELQ05823 741 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 NOLC1Q14978 699 aaKnown RBP eCLIP15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 CCDC85BQ15834 202 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 CNNM4Q6P4Q7 775 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 KCNT2Q6UVM3 1135 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 ZPBP2Q6X784 338 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 TMEM173Q86WV6 379 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 MAP4K3Q8IVH8 894 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 THNSL1Q8IYQ7 743 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 PPM1EQ8WY54 764 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 ZNF558Q96NG5 402 aa15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 PYM1Q9BRP8 204 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 C11orf84Q9BUA3 381 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-207ENST00000595631 PLVAPQ9BX97 442 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms