RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 SFPQP23246 707 aaKnown RBP eCLIP18.74■□□□□ 0.59
LTBP4-209ENST00000594116 MAPK7Q13164 816 aa18.74■□□□□ 0.59
LTBP4-209ENST00000594116 DUSP6Q16828 381 aa18.74■□□□□ 0.59
LTBP4-209ENST00000594116 KLHL40Q2TBA0 621 aa18.74■□□□□ 0.59
LTBP4-209ENST00000594116 DDX12PQ92771 950 aa18.74■□□□□ 0.59
LTBP4-209ENST00000594116 DNAJC19Q96DA6 116 aa18.74■□□□□ 0.59
LTBP4-209ENST00000594116 ZNF558Q96NG5 402 aa18.74■□□□□ 0.59
LTBP4-209ENST00000594116 INO80BQ9C086 356 aaPredicted RBP18.74■□□□□ 0.59
LTBP4-209ENST00000594116 CLSTN2Q9H4D0 955 aa18.74■□□□□ 0.59
LTBP4-209ENST00000594116 PUF60Q9UHX1 559 aaKnown RBP18.74■□□□□ 0.59
LTBP4-209ENST00000594116 BARX2Q9UMQ3 279 aaPredicted RBP18.74■□□□□ 0.59
LTBP4-209ENST00000594116 A0A087WZ62 844 aa18.73■□□□□ 0.59
LTBP4-209ENST00000594116 PER2O15055 1255 aa18.73■□□□□ 0.59
LTBP4-209ENST00000594116 CSDE1O75534 798 aaKnown RBP18.73■□□□□ 0.59
LTBP4-209ENST00000594116 PRR29P0C7W0 189 aa18.73■□□□□ 0.59
LTBP4-209ENST00000594116 AFMP43652 599 aa18.73■□□□□ 0.59
LTBP4-209ENST00000594116 GIT2Q14161 759 aa18.73■□□□□ 0.59
LTBP4-209ENST00000594116 RNF169Q8NCN4 708 aa18.73■□□□□ 0.59
LTBP4-209ENST00000594116 REEP2Q9BRK0 252 aa18.73■□□□□ 0.59
LTBP4-209ENST00000594116 FDXACB1Q9BRP7 624 aaPredicted RBP18.73■□□□□ 0.59
LTBP4-209ENST00000594116 MRPL9Q9BYD2 267 aaKnown RBP18.73■□□□□ 0.59
LTBP4-209ENST00000594116 SUCLA2Q9P2R7 463 aaPredicted RBP18.73■□□□□ 0.59
LTBP4-209ENST00000594116 ODF2LQ9ULJ1 636 aa18.73■□□□□ 0.59
LTBP4-209ENST00000594116 NPHP3-ACAD11A0A0J9YXS1 232 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 FRMD3A2A2Y4 597 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 KRT17Q04695 432 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 DPYDQ12882 1025 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 CUL4BQ13620 913 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 KCNC3Q14003 757 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 POSTNQ15063 836 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 HERC4Q5GLZ8 1057 aaPredicted RBP18.72■□□□□ 0.59
LTBP4-209ENST00000594116 TMEM184AQ6ZMB5 413 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 RHPN2Q8IUC4 686 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 DAW1Q8N136 415 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 VN1R2Q8NFZ6 395 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 HELQQ8TDG4 1101 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 TCP11Q8WWU5 503 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 TCF25Q9BQ70 676 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 NGRNQ9NPE2 291 aaKnown RBP18.72■□□□□ 0.59
LTBP4-209ENST00000594116 BMP2KQ9NSY1 1161 aaPredicted RBP18.72■□□□□ 0.59
LTBP4-209ENST00000594116 SPG21Q9NZD8 308 aa18.72■□□□□ 0.59
LTBP4-209ENST00000594116 HOOK1Q9UJC3 728 aaKnown RBP18.72■□□□□ 0.59
LTBP4-209ENST00000594116 USP15Q9Y4E8 981 aaPredicted RBP18.72■□□□□ 0.59
LTBP4-209ENST00000594116 HIP1RO75146 1068 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 SRGAP2BP0DMP2 458 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 SKIP12755 728 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 CASP1P29466 404 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 ARL2P36404 184 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 PBX3P40426 434 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 PHKA2P46019 1235 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 ZNF131P52739 623 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 SKOR2Q2VWA4 1001 aaPredicted RBP18.71■□□□□ 0.59
LTBP4-209ENST00000594116 PLPP4Q5VZY2 271 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 DYMQ7RTS9 669 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 RNF135Q8IUD6 432 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 KIFAP3Q92845 792 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 NUP62CLQ9H1M0 184 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 BLZF1Q9H2G9 400 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 GPRC5CQ9NQ84 441 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 ENTPD7Q9NQZ7 604 aa18.71■□□□□ 0.59
LTBP4-209ENST00000594116 LOC730098B7Z3J9 87 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 KLRC4O43908 158 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 KRT18P05783 430 aaKnown RBP18.7■□□□□ 0.58
LTBP4-209ENST00000594116 RBM10P98175 930 aaKnown RBP18.7■□□□□ 0.58
LTBP4-209ENST00000594116 CACNB1Q02641 598 aaPredicted RBP18.7■□□□□ 0.58
LTBP4-209ENST00000594116 RAD51AP2Q09MP3 1159 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 PNOCQ13519 176 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 TWF2Q6IBS0 349 aaKnown RBP18.7■□□□□ 0.58
LTBP4-209ENST00000594116 SLC39A11Q8N1S5 342 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 SPATA20Q8TB22 786 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 SUSD6Q92537 303 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 TMEM143Q96AN5 459 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 DRC1Q96MC2 740 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 NLRP4Q96MN2 994 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 POLR3FQ9H1D9 316 aaPredicted RBP18.7■□□□□ 0.58
LTBP4-209ENST00000594116 IFT122Q9HBG6 1241 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 MUTYHQ9UIF7 546 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 PIN4Q9Y237 131 aaKnown RBP18.7■□□□□ 0.58
LTBP4-209ENST00000594116 PIEZO1Q92508 2521 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 ZNF318Q5VUA4 2279 aa18.7■□□□□ 0.58
LTBP4-209ENST00000594116 PVALEFA0A1B0GWK0 134 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 CARNS1A5YM72 827 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 RAB27AP51159 221 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 ASIC1P78348 528 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 CBX2Q14781 532 aaPredicted RBP18.69■□□□□ 0.58
LTBP4-209ENST00000594116 UNC13DQ70J99 1090 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 MAEAQ7L5Y9 396 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 CATSPER4Q7RTX7 472 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 KSR1Q8IVT5 923 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 PSPC1Q8WXF1 523 aaKnown RBP18.69■□□□□ 0.58
LTBP4-209ENST00000594116 PHF7Q9BWX1 381 aaPredicted RBP18.69■□□□□ 0.58
LTBP4-209ENST00000594116 C17orf75Q9HAS0 396 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 FAM105AQ9NUU6 356 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 TMEM63CQ9P1W3 806 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 COL4A3BPQ9Y5P4 624 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 TECTAO75443 2155 aa18.69■□□□□ 0.58
LTBP4-209ENST00000594116 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.68■□□□□ 0.58
LTBP4-209ENST00000594116 HIDE1A8MVS5 230 aa18.68■□□□□ 0.58
LTBP4-209ENST00000594116 TRAK2O60296 914 aa18.68■□□□□ 0.58
LTBP4-209ENST00000594116 ZNF623O75123 536 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms