RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 LDHAP00338 332 aaKnown RBP16.52■□□□□ 0.23
VRK3-207ENST00000594092 PROZP22891 400 aa16.52■□□□□ 0.23
VRK3-207ENST00000594092 MCL1Q07820 350 aa16.52■□□□□ 0.23
VRK3-207ENST00000594092 ATF7IP2Q5U623 682 aa16.52■□□□□ 0.23
VRK3-207ENST00000594092 GDF6Q6KF10 455 aaPredicted RBP16.52■□□□□ 0.23
VRK3-207ENST00000594092 CRELD2Q6UXH1 353 aaPredicted RBP16.52■□□□□ 0.23
VRK3-207ENST00000594092 SRGAP1Q7Z6B7 1085 aa16.52■□□□□ 0.23
VRK3-207ENST00000594092 DNAJC5GQ8N7S2 189 aa16.52■□□□□ 0.23
VRK3-207ENST00000594092 PARD3BQ8TEW8 1205 aa16.52■□□□□ 0.23
VRK3-207ENST00000594092 PRIMPOLQ96LW4 560 aa16.52■□□□□ 0.23
VRK3-207ENST00000594092 NAA15Q9BXJ9 866 aaKnown RBP16.52■□□□□ 0.23
VRK3-207ENST00000594092 FAM207AQ9NSI2 230 aaPredicted RBP16.52■□□□□ 0.23
VRK3-207ENST00000594092 GRIN2DO15399 1336 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 GTPBP10A4D1E9 387 aaKnown RBP16.51■□□□□ 0.23
VRK3-207ENST00000594092 ARHGAP6O43182 974 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 ACOT2P49753 483 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 CBWD6Q4V339 395 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 FAM47CQ5HY64 1035 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 CBWD3Q5JTY5 395 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 CBWD5Q5RIA9 395 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 ZBTB41Q5SVQ8 909 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 ZBTB33Q86T24 672 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 SESTD1Q86VW0 696 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 TMEM139Q8IV31 216 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 TMC2Q8TDI7 906 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 TCHPQ9BT92 498 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 LSM14BQ9BX40 385 aaKnown RBP16.51■□□□□ 0.23
VRK3-207ENST00000594092 CDHR5Q9HBB8 845 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 TNFSF13BQ9Y275 285 aa16.51■□□□□ 0.23
VRK3-207ENST00000594092 CNTNAP2Q9UHC6 1331 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 A0A1W2PQJ5 194 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 FAM189A1O60320 539 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 HARSP12081 509 aaKnown RBP16.5■□□□□ 0.23
VRK3-207ENST00000594092 KRT9P35527 623 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 ACLYP53396 1101 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 PPP3CAQ08209 521 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
VRK3-207ENST00000594092 EXOC3L4Q17RC7 722 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 TMEM132AQ24JP5 1023 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 EEF1DP3Q658K8 133 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 TAF2Q6P1X5 1199 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 MPZL3Q6UWV2 235 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 GBP6Q6ZN66 633 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 NME8Q8N427 588 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 NEK11Q8NG66 645 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 CCDC127Q96BQ5 260 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 GCOM2Q9BZD3 368 aaPredicted RBP16.5■□□□□ 0.23
VRK3-207ENST00000594092 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.5■□□□□ 0.23
VRK3-207ENST00000594092 ABHD10Q9NUJ1 306 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 AGPAT5Q9NUQ2 364 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 GINS2Q9Y248 185 aa16.5■□□□□ 0.23
VRK3-207ENST00000594092 LUC7L2Q9Y383 392 aaKnown RBP16.5■□□□□ 0.23
VRK3-207ENST00000594092 LRRIQ3A6PVS8 624 aaPredicted RBP16.49■□□□□ 0.23
VRK3-207ENST00000594092 OGTO15294 1046 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 CABYRO75952 493 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 NOL4O94818 638 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 SLC9A1P19634 815 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 APBA1Q02410 837 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 ENPEPQ07075 957 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 DPY19L2P1Q6NXN4 242 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 CDR2LQ86X02 465 aaPredicted RBP16.49■□□□□ 0.23
VRK3-207ENST00000594092 OSMRQ99650 979 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 TSEN34Q9BSV6 310 aaKnown RBP16.49■□□□□ 0.23
VRK3-207ENST00000594092 KCND1Q9NSA2 647 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 MOXD2PA6NHM9 499 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 TSPAN1O60635 241 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 DARSP14868 501 aaKnown RBP16.49■□□□□ 0.23
VRK3-207ENST00000594092 ARF4P18085 180 aaPredicted RBP16.49■□□□□ 0.23
VRK3-207ENST00000594092 FGFR4P22455 802 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 PON1P27169 355 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 GCLMP48507 274 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 ZBED6P86452 979 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 MYL7Q01449 175 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 PSMD6Q15008 389 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 ZNF568Q3ZCX4 644 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 SEZ6Q53EL9 994 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 CPB2Q96IY4 423 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 POP1Q99575 1024 aaKnown RBP16.49■□□□□ 0.23
VRK3-207ENST00000594092 UNC93B1Q9H1C4 597 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 CDT1Q9H211 546 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 PLCB1Q9NQ66 1216 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 GCNT4Q9P109 453 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 FRMPD3Q5JV73 1810 aa16.49■□□□□ 0.23
VRK3-207ENST00000594092 BRCA2P51587 3418 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 DNAH12Q6ZR08 3092 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 CCP110O43303 1012 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 N4BP1O75113 896 aaKnown RBP16.48■□□□□ 0.23
VRK3-207ENST00000594092 ERLIN2O94905 339 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 ACTN1P12814 892 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 WNT7BP56706 349 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 ITGA7Q13683 1181 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 TSR1Q2NL82 804 aaKnown RBP16.48■□□□□ 0.23
VRK3-207ENST00000594092 USP37Q86T82 979 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 SERINC5Q86VE9 423 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 ZNF710Q8N1W2 664 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 ZNF397Q8NF99 534 aaPredicted RBP16.48■□□□□ 0.23
VRK3-207ENST00000594092 OR8K1Q8NGG5 319 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 VTI1AQ96AJ9 217 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 DNAJC7Q99615 494 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 GANQ9H2C0 597 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms