RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 MAFGO15525 162 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 ATG13O75143 517 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 POU2F2P09086 479 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 GBP1P32455 592 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 ACTR2P61160 394 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 CCDC178Q5BJE1 867 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 CYP2U1Q7Z449 544 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 RNF168Q8IYW5 571 aaPredicted RBP13.4□□□□□ -0.26
ZNF558-202ENST00000593891 CAMKK1Q8N5S9 505 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 SMARCC2Q8TAQ2 1214 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 DCBLD2Q96PD2 775 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 NUSAP1Q9BXS6 441 aaKnown RBP13.4□□□□□ -0.26
ZNF558-202ENST00000593891 PRORYQ9H606 182 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 MARCH5Q9NX47 278 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 DNMT3BQ9UBC3 853 aaKnown RBP13.4□□□□□ -0.26
ZNF558-202ENST00000593891 SPAG17Q6Q759 2223 aa13.4□□□□□ -0.26
ZNF558-202ENST00000593891 ABCA12Q86UK0 2595 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 NR1I2O75469 434 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 C22orf31O95567 290 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 DARSP14868 501 aaKnown RBP13.39□□□□□ -0.27
ZNF558-202ENST00000593891 RPL17P18621 184 aaKnown RBP13.39□□□□□ -0.27
ZNF558-202ENST00000593891 FGFR4P22455 802 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 TMOD1P28289 359 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 OR1G1P47890 313 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 RAB27AP51159 221 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 FAM193AP78312 1265 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 CYP4F3Q08477 520 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 USP41Q3LFD5 358 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 DEPDC1BQ8WUY9 529 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 MTMR8Q96EF0 704 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 HCFC1R1Q9NWW0 138 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 EVLQ9UI08 416 aaPredicted RBP13.39□□□□□ -0.27
ZNF558-202ENST00000593891 STK24Q9Y6E0 443 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 DOCK5Q9H7D0 1870 aa13.39□□□□□ -0.27
ZNF558-202ENST00000593891 ZNF316A6NFI3 1004 aaPredicted RBP13.38□□□□□ -0.27
ZNF558-202ENST00000593891 PCNX2A6NKB5 2137 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 MEIS3P2A8K0S8 358 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 BACH1O14867 736 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 DCLK1O15075 740 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 ZNF623O75123 536 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 EFEMP2O95967 443 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 ITGB5P18084 799 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 FCARP24071 287 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 FAM78AQ5JUQ0 283 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 COLEC12Q5KU26 742 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 FAM160B1Q5W0V3 765 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 KRT25Q7Z3Z0 450 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 C11orf74Q86VG3 221 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 CUL5Q93034 780 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 SDF4Q9BRK5 362 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 ZKSCAN3Q9BRR0 538 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 ECHDC1Q9NTX5 307 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 FAM105AQ9NUU6 356 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 KCNK4Q9NYG8 393 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 SRPK3Q9UPE1 567 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 SHROOM3Q8TF72 1996 aa13.38□□□□□ -0.27
ZNF558-202ENST00000593891 DOPEY1Q5JWR5 2465 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 FAM205CA6NFA0 338 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 KLRF2D3W0D1 207 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 MAGEB2O15479 319 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 POMCP01189 267 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 CSRP3P50461 194 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 CLCN3P51790 818 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 ATXN3P54252 364 aaPredicted RBP13.37□□□□□ -0.27
ZNF558-202ENST00000593891 TRIP6Q15654 476 aaKnown RBP13.37□□□□□ -0.27
ZNF558-202ENST00000593891 UVSSAQ2YD98 709 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 TRIM61Q5EBN2 209 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 ZKSCAN2Q63HK3 967 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 MFSD6Q6ZSS7 791 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 SLC7A14Q8TBB6 771 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 ZNF668Q96K58 619 aaPredicted RBP13.37□□□□□ -0.27
ZNF558-202ENST00000593891 B3GALT6Q96L58 329 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 FCRL3Q96P31 734 aaPredicted RBP13.37□□□□□ -0.27
ZNF558-202ENST00000593891 COLEC11Q9BWP8 271 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 PCDHB9Q9Y5E1 797 aa13.37□□□□□ -0.27
ZNF558-202ENST00000593891 TEX51A0A1B0GUA7 166 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 SLC38A8A6NNN8 435 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 B8ZZF3 427 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 FOXP2O15409 715 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 ZNF862O60290 1169 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 HMMRO75330 724 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 RHOP08100 348 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 FTH1P19P0C7X4 201 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 PCP11498 1178 aaKnown RBP13.36□□□□□ -0.27
ZNF558-202ENST00000593891 CCINQ13939 588 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 WDR44Q5JSH3 913 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 VITQ6UXI7 678 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 LRRC69Q6ZNQ3 347 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 RALGPS2Q86X27 583 aaPredicted RBP13.36□□□□□ -0.27
ZNF558-202ENST00000593891 FTSJ3Q8IY81 847 aaKnown RBP13.36□□□□□ -0.27
ZNF558-202ENST00000593891 CKAP2LQ8IYA6 745 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 PNPLA1Q8N8W4 532 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 NLRP7Q8WX94 980 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 PIGKQ92643 395 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 ESR2Q92731 530 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 LRRCC1Q9C099 1032 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 RSAD1Q9HA92 442 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 SEPT9Q9UHD8 586 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms