RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CWF19L1Q69YN2 538 aaKnown RBP16.38■□□□□ 0.21
PNKP-202ENST00000593706 COLGALT2Q8IYK4 626 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 SIX5Q8N196 739 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 WASF1Q92558 559 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 TNFRSF25Q93038 417 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 ZFP42Q96MM3 310 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 CLUHO75153 1309 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 CITO14578 2027 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 MYH11P35749 1972 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 PRR23AA6NEV1 266 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 FAM205CA6NFA0 338 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 JAK2O60674 1132 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 NBL1P41271 181 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 RBM25P49756 843 aaKnown RBP16.37■□□□□ 0.21
PNKP-202ENST00000593706 PTENP60484 403 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 CAPSQ13938 189 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 ASCL5Q7RTU5 278 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 TAS1R1Q7RTX1 841 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 CMASQ8NFW8 434 aaPredicted RBP16.37■□□□□ 0.21
PNKP-202ENST00000593706 SNX27Q96L92 541 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 EIF2AK1Q9BQI3 630 aaKnown RBP16.37■□□□□ 0.21
PNKP-202ENST00000593706 CSRNP2Q9H175 543 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 NXF3Q9H4D5 531 aaKnown RBP16.37■□□□□ 0.21
PNKP-202ENST00000593706 XPNPEP1Q9NQW7 623 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 IGSF9Q9P2J2 1179 aa16.37■□□□□ 0.21
PNKP-202ENST00000593706 F8W810 466 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 STK25O00506 426 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 DGAT1O75907 488 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 AOC1P19801 751 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 MBTD1Q05BQ5 628 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 DSC1Q08554 894 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 NR5A1Q13285 461 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 CALCRLQ16602 461 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 EARS2Q5JPH6 523 aaKnown RBP16.36■□□□□ 0.21
PNKP-202ENST00000593706 FRMD5Q7Z6J6 570 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 GLYCTKQ8IVS8 523 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 ASAP3Q8TDY4 903 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 SMG7Q92540 1137 aaKnown RBP16.36■□□□□ 0.21
PNKP-202ENST00000593706 B3GALT6Q96L58 329 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 COLEC11Q9BWP8 271 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 PIDD1Q9HB75 910 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 PCDHA12Q9UN75 941 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 GIT1Q9Y2X7 761 aa16.36■□□□□ 0.21
PNKP-202ENST00000593706 PATJQ8NI35 1801 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 NARSO43776 548 aaKnown RBP16.35■□□□□ 0.21
PNKP-202ENST00000593706 N4BP1O75113 896 aaKnown RBP16.35■□□□□ 0.21
PNKP-202ENST00000593706 RFPL2O75678 378 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 SLITRK3O94933 977 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 CFHP08603 1231 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 SPATA31D3P0C874 917 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 ARF4P18085 180 aaPredicted RBP16.35■□□□□ 0.21
PNKP-202ENST00000593706 DSG1Q02413 1049 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 KIAA0319Q5VV43 1072 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 SLC27A1Q6PCB7 646 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 CYP26C1Q6V0L0 522 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 SPATA31D4Q6ZUB0 917 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 PALB2Q86YC2 1186 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 IFNLR1Q8IU57 520 aaPredicted RBP16.35■□□□□ 0.21
PNKP-202ENST00000593706 RNF168Q8IYW5 571 aaPredicted RBP16.35■□□□□ 0.21
PNKP-202ENST00000593706 NKD2Q969F2 451 aaPredicted RBP16.35■□□□□ 0.21
PNKP-202ENST00000593706 RTP3Q9BQQ7 232 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 WDR6Q9NNW5 1121 aaKnown RBP16.35■□□□□ 0.21
PNKP-202ENST00000593706 LIMCH1Q9UPQ0 1083 aa16.35■□□□□ 0.21
PNKP-202ENST00000593706 EP300Q09472 2414 aaPredicted RBP16.35■□□□□ 0.21
PNKP-202ENST00000593706 B4GALT5O43286 388 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 NEMFO60524 1076 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 NPTXRO95502 500 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 AKAP5P24588 427 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 POU5F1BQ06416 359 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 GRIK3Q13003 919 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 USP41Q3LFD5 358 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 FUT10Q6P4F1 479 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 GET4Q7L5D6 327 aaPredicted RBP16.34■□□□□ 0.21
PNKP-202ENST00000593706 CDR2LQ86X02 465 aaPredicted RBP16.34■□□□□ 0.21
PNKP-202ENST00000593706 CCDC105Q8IYK2 499 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 RSAD2Q8WXG1 361 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 POLR3FQ9H1D9 316 aaPredicted RBP16.34■□□□□ 0.21
PNKP-202ENST00000593706 TTC12Q9H892 705 aaPredicted RBP16.34■□□□□ 0.21
PNKP-202ENST00000593706 RXFP1Q9HBX9 757 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.34■□□□□ 0.21
PNKP-202ENST00000593706 ANKEF1Q9NU02 776 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 MIOSQ9NXC5 875 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 ADAM28Q9UKQ2 775 aa16.34■□□□□ 0.21
PNKP-202ENST00000593706 PDCD11Q14690 1871 aaKnown RBP16.33■□□□□ 0.21
PNKP-202ENST00000593706 CACNA1IQ9P0X4 2223 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 DNAH14Q0VDD8 3507 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 LRRIQ4A6NIV6 560 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 PI15O43692 258 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 USO1O60763 962 aaKnown RBP16.33■□□□□ 0.2
PNKP-202ENST00000593706 LYPLA2O95372 231 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 NPR3P17342 541 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 GLRA2P23416 452 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 TXKP42681 527 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 RARRES1P49788 294 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 CREMQ03060 361 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 AMHR2Q16671 573 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 PIGOQ8TEQ8 1089 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 HDAC7Q8WUI4 952 aa16.33■□□□□ 0.2
PNKP-202ENST00000593706 RIN2Q8WYP3 895 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms