RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 OTUD6AQ7L8S5 288 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 ASCL5Q7RTU5 278 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 PPFIBP1Q86W92 1011 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 DIS3L2Q8IYB7 885 aaKnown RBP11.86□□□□□ -0.51
USE1-203ENST00000593597 SLFN12Q8IYM2 578 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 CMASQ8NFW8 434 aaPredicted RBP11.86□□□□□ -0.51
USE1-203ENST00000593597 RSAD2Q8WXG1 361 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 BSNDQ8WZ55 320 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 NAP1L4Q99733 375 aaKnown RBP11.86□□□□□ -0.51
USE1-203ENST00000593597 EMILIN2Q9BXX0 1053 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 POLR3FQ9H1D9 316 aaPredicted RBP11.86□□□□□ -0.51
USE1-203ENST00000593597 TTC12Q9H892 705 aaPredicted RBP11.86□□□□□ -0.51
USE1-203ENST00000593597 KCNK12Q9HB15 430 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 MRPL17Q9NRX2 175 aaKnown RBP11.86□□□□□ -0.51
USE1-203ENST00000593597 CHST7Q9NS84 486 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 ANKEF1Q9NU02 776 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 KLK14Q9P0G3 267 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 KANSL3Q9P2N6 904 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 USP20Q9Y2K6 914 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 PATJQ8NI35 1801 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 PROB1E7EW31 1015 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 GFRA3O60609 400 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 USO1O60763 962 aaKnown RBP11.85□□□□□ -0.51
USE1-203ENST00000593597 MED24O75448 989 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 DGAT1O75907 488 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 NPTXRO95502 500 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 URODP06132 367 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 SPATA31D3P0C874 917 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 XBP1P17861 261 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 RPL17P18621 184 aaKnown RBP11.85□□□□□ -0.51
USE1-203ENST00000593597 IGFBP6P24592 240 aaPredicted RBP11.85□□□□□ -0.51
USE1-203ENST00000593597 TXKP42681 527 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 GLUD2P49448 558 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 ANAPC15P60006 121 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 MXD4Q14582 209 aaPredicted RBP11.85□□□□□ -0.51
USE1-203ENST00000593597 BMS1Q14692 1282 aaKnown RBP11.85□□□□□ -0.51
USE1-203ENST00000593597 NAB2Q15742 525 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 ASTLQ6HA08 431 aaPredicted RBP11.85□□□□□ -0.51
USE1-203ENST00000593597 C15orf39Q6ZRI6 1047 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 SPATA31D4Q6ZUB0 917 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 EXOC8Q8IYI6 725 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 PLCD3Q8N3E9 789 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 CNNM3Q8NE01 707 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 ATOH1Q92858 354 aaPredicted RBP11.85□□□□□ -0.51
USE1-203ENST00000593597 CCDC51Q96ER9 411 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 FAM193BQ96PV7 902 aaPredicted RBP11.85□□□□□ -0.51
USE1-203ENST00000593597 MYADMQ96S97 322 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 NFKBIZQ9BYH8 718 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 PCDHA12Q9UN75 941 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 DUSP12Q9UNI6 340 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 CLUHO75153 1309 aa11.85□□□□□ -0.51
USE1-203ENST00000593597 MIA3Q5JRA6 1907 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 CCDC195A0A1B0GUA6 201 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 A0A1B0GUA9 196 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 PTGESO14684 152 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 NEMFO60524 1076 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 BAG4O95429 457 aaKnown RBP11.84□□□□□ -0.51
USE1-203ENST00000593597 SEC24BO95487 1268 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 TDGQ13569 410 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 RTP2Q5QGT7 225 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 CDCA2Q69YH5 1023 aaPredicted RBP11.84□□□□□ -0.51
USE1-203ENST00000593597 FUT10Q6P4F1 479 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 SLC27A1Q6PCB7 646 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 LILRA6Q6PI73 481 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 PPP4R3CPQ6ZMV5 832 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 MAEAQ7L5Y9 396 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 GLYCTKQ8IVS8 523 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 TMEM87AQ8NBN3 555 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 ST13P5Q8NFI4 369 aaPredicted RBP11.84□□□□□ -0.51
USE1-203ENST00000593597 RHOBTB2Q9BYZ6 727 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 WDR6Q9NNW5 1121 aaKnown RBP11.84□□□□□ -0.51
USE1-203ENST00000593597 UBN1Q9NPG3 1134 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 GIT1Q9Y2X7 761 aa11.84□□□□□ -0.51
USE1-203ENST00000593597 ZMYM2Q9UBW7 1377 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 CITO14578 2027 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 KRBA1A5PL33 1030 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 PRR23AA6NEV1 266 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 TGM5O43548 720 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 ST18O60284 1047 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 MARCH6O60337 910 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 KIF4AO95239 1232 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 GLUD1P00367 558 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 ADH1AP07327 375 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 AOC1P19801 751 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 NBL1P41271 181 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 NUBP1P53384 320 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 TFDP1Q14186 410 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 PCBP1Q15365 356 aaKnown RBP eCLIP11.83□□□□□ -0.52
USE1-203ENST00000593597 ECM1Q16610 540 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 EEF1DP3Q658K8 133 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 PRSS55Q6UWB4 352 aaPredicted RBP11.83□□□□□ -0.52
USE1-203ENST00000593597 OTOP3Q7RTS5 596 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 CATSPER3Q86XQ3 398 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 PALB2Q86YC2 1186 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 FLCNQ8NFG4 579 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 HASPINQ8TF76 798 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 WASF1Q92558 559 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 CCDC113Q9H0I3 377 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 FZD8Q9H461 694 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 PDZD7Q9H5P4 517 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms