RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 GRID2IPA4D2P6 1211 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 ASB14A6NK59 587 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 IGHA2P01877 340 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 MCM3P25205 808 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 CNGA1P29973 690 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 VSNL1P62760 191 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 SLC39A4Q6P5W5 647 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 MSL3Q8N5Y2 521 aaKnown RBP20.27■□□□□ 0.84
HDAC5-212ENST00000593013 ZSWIM2Q8NEG5 633 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 LNX1Q8TBB1 728 aaPredicted RBP20.27■□□□□ 0.84
HDAC5-212ENST00000593013 TMC2Q8TDI7 906 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 RUBCNQ92622 972 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 KIFC3Q9BVG8 833 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 FUT8Q9BYC5 575 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 SLC5A4Q9NY91 659 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 CASP8AP2Q9UKL3 1982 aa20.27■□□□□ 0.84
HDAC5-212ENST00000593013 FKTNO75072 461 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 SASH3O75995 380 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 H2AFZP0C0S5 128 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 ATP4AP20648 1035 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 GARTP22102 1010 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 RGS2P41220 211 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 MXI1P50539 228 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 SNRNP35Q16560 246 aaKnown RBP20.27■□□□□ 0.83
HDAC5-212ENST00000593013 BRDTQ58F21 947 aaPredicted RBP20.27■□□□□ 0.83
HDAC5-212ENST00000593013 H2AFVQ71UI9 128 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 CD99L2Q8TCZ2 262 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 MFSD14AQ96MC6 490 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 UBXN6Q9BZV1 441 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 ZNF302Q9NR11 478 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 GABRQQ9UN88 632 aa20.27■□□□□ 0.83
HDAC5-212ENST00000593013 NCANO14594 1321 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 MAP2K7O14733 419 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 NCK2O43639 380 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 OATP04181 439 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 HSPA8P11142 646 aaKnown RBP20.26■□□□□ 0.83
HDAC5-212ENST00000593013 UBA1P22314 1058 aaKnown RBP20.26■□□□□ 0.83
HDAC5-212ENST00000593013 GTF2H1P32780 548 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 PLA2G4AP47712 749 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 GCLMP48507 274 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 NAP1L1P55209 391 aaKnown RBP20.26■□□□□ 0.83
HDAC5-212ENST00000593013 EMC2Q15006 297 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 ARMCX2Q7L311 632 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 CYFIP1Q7L576 1253 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 IFT74Q96LB3 600 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 MPHOSPH6Q99547 160 aaKnown RBP20.26■□□□□ 0.83
HDAC5-212ENST00000593013 APBA2Q99767 749 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 NIFKQ9BYG3 293 aaKnown RBP20.26■□□□□ 0.83
HDAC5-212ENST00000593013 TMEM117Q9H0C3 514 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 POLR3FQ9H1D9 316 aaPredicted RBP20.26■□□□□ 0.83
HDAC5-212ENST00000593013 COQ4Q9Y3A0 265 aa20.26■□□□□ 0.83
HDAC5-212ENST00000593013 CES2O00748 559 aa20.25■□□□□ 0.83
HDAC5-212ENST00000593013 CYP2B6P20813 491 aa20.25■□□□□ 0.83
HDAC5-212ENST00000593013 FLT3LGP49771 235 aa20.25■□□□□ 0.83
HDAC5-212ENST00000593013 SP4Q02446 784 aa20.25■□□□□ 0.83
HDAC5-212ENST00000593013 PRKCZQ05513 592 aa20.25■□□□□ 0.83
HDAC5-212ENST00000593013 TRMT1LQ7Z2T5 733 aaKnown RBP20.25■□□□□ 0.83
HDAC5-212ENST00000593013 CBWD2Q8IUF1 395 aa20.25■□□□□ 0.83
HDAC5-212ENST00000593013 LRRC57Q8N9N7 239 aa20.25■□□□□ 0.83
HDAC5-212ENST00000593013 CEP89Q96ST8 783 aa20.25■□□□□ 0.83
HDAC5-212ENST00000593013 TINF2Q9BSI4 451 aa20.25■□□□□ 0.83
HDAC5-212ENST00000593013 DHX33Q9H6R0 707 aaKnown RBP20.25■□□□□ 0.83
HDAC5-212ENST00000593013 FLRT1Q9NZU1 646 aa20.25■□□□□ 0.83
HDAC5-212ENST00000593013 FARP2O94887 1054 aaPredicted RBP20.24■□□□□ 0.83
HDAC5-212ENST00000593013 SNAI1O95863 264 aaPredicted RBP20.24■□□□□ 0.83
HDAC5-212ENST00000593013 TGFB3P10600 412 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 SOX10P56693 466 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 TAS1R3Q7RTX0 852 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 SPATA4Q8NEY3 305 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 PARD3BQ8TEW8 1205 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 KATNBL1Q9H079 304 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 ABCB6Q9NP58 842 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 L1RE1Q9UN81 338 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 CTCFP49711 727 aaPredicted RBP20.24■□□□□ 0.83
HDAC5-212ENST00000593013 NEDD9Q14511 834 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 CCL14Q16627 93 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 MTERF2Q49AM1 385 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 OLFML2BQ68BL8 750 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 SEPT14Q6ZU15 432 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 SLFN11Q7Z7L1 901 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 ARHGEF19Q8IW93 802 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 AFAP1L1Q8TED9 768 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 U2AF1L4Q8WU68 220 aaKnown RBP20.24■□□□□ 0.83
HDAC5-212ENST00000593013 TMEM8AQ9HCN3 771 aa20.24■□□□□ 0.83
HDAC5-212ENST00000593013 GSTTP1A0A1W2PQM5 241 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 GOLGA8IPA6NC78 632 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 GOLGA8JA6NMD2 632 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 FOXN3O00409 490 aaPredicted RBP20.23■□□□□ 0.83
HDAC5-212ENST00000593013 GNRH1P01148 92 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 PIGRP01833 764 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 TMEM253P0C7T8 217 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 PAFAH1B1P43034 410 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 CYP24A1Q07973 514 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 C2orf54Q08AI8 447 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 GLIPR1L2Q4G1C9 344 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 KRT39Q6A163 491 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 USP37Q86T82 979 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 TPCN2Q8NHX9 752 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 PCYT2Q99447 389 aa20.23■□□□□ 0.83
HDAC5-212ENST00000593013 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms