RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 CPB2Q96IY4 423 aa20.9■□□□□ 0.94
CCDC43-205ENST00000592333 C8orf76Q96K31 380 aa20.9■□□□□ 0.94
CCDC43-205ENST00000592333 TMEM60Q9H2L4 133 aa20.9■□□□□ 0.94
CCDC43-205ENST00000592333 FZD8Q9H461 694 aa20.9■□□□□ 0.94
CCDC43-205ENST00000592333 SH2B1Q9NRF2 756 aaPredicted RBP20.9■□□□□ 0.94
CCDC43-205ENST00000592333 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.9■□□□□ 0.94
CCDC43-205ENST00000592333 CHST7Q9NS84 486 aa20.9■□□□□ 0.94
CCDC43-205ENST00000592333 USO1O60763 962 aaKnown RBP20.89■□□□□ 0.93
CCDC43-205ENST00000592333 OR52Z1P0C646 297 aa20.89■□□□□ 0.93
CCDC43-205ENST00000592333 ATP2B1P20020 1258 aa20.89■□□□□ 0.93
CCDC43-205ENST00000592333 RBM25P49756 843 aaKnown RBP20.89■□□□□ 0.93
CCDC43-205ENST00000592333 SCNN1GP51170 649 aa20.89■□□□□ 0.93
CCDC43-205ENST00000592333 CREMQ03060 361 aa20.89■□□□□ 0.93
CCDC43-205ENST00000592333 ST3GAL1Q11201 340 aa20.89■□□□□ 0.93
CCDC43-205ENST00000592333 HAUS3Q68CZ6 603 aa20.89■□□□□ 0.93
CCDC43-205ENST00000592333 CCDC149Q6ZUS6 474 aa20.89■□□□□ 0.93
CCDC43-205ENST00000592333 ALYREFQ86V81 257 aaKnown RBP20.89■□□□□ 0.93
CCDC43-205ENST00000592333 ZBTB8OSQ8IWT0 167 aa20.89■□□□□ 0.93
CCDC43-205ENST00000592333 C12orf76Q8N812 135 aaPredicted RBP20.89■□□□□ 0.93
CCDC43-205ENST00000592333 GSTCDQ8NEC7 633 aa20.89■□□□□ 0.93
CCDC43-205ENST00000592333 FBXO18Q8NFZ0 1043 aa20.89■□□□□ 0.93
CCDC43-205ENST00000592333 HES2Q9Y543 173 aa20.89■□□□□ 0.93
CCDC43-205ENST00000592333 CYP11B2P19099 503 aa20.88■□□□□ 0.93
CCDC43-205ENST00000592333 AVPR2P30518 371 aa20.88■□□□□ 0.93
CCDC43-205ENST00000592333 MRE11P49959 708 aa20.88■□□□□ 0.93
CCDC43-205ENST00000592333 PPP2R5AQ15172 486 aa20.88■□□□□ 0.93
CCDC43-205ENST00000592333 TMC5Q6UXY8 1006 aa20.88■□□□□ 0.93
CCDC43-205ENST00000592333 ZFP42Q96MM3 310 aa20.88■□□□□ 0.93
CCDC43-205ENST00000592333 NXF3Q9H4D5 531 aaKnown RBP20.88■□□□□ 0.93
CCDC43-205ENST00000592333 PLEKHA4Q9H4M7 779 aa20.88■□□□□ 0.93
CCDC43-205ENST00000592333 MIOSQ9NXC5 875 aa20.88■□□□□ 0.93
CCDC43-205ENST00000592333 FNIP2Q9P278 1114 aa20.88■□□□□ 0.93
CCDC43-205ENST00000592333 PRG3Q9Y2Y8 225 aaPredicted RBP20.88■□□□□ 0.93
CCDC43-205ENST00000592333 ZDBF2Q9HCK1 2354 aa20.88■□□□□ 0.93
CCDC43-205ENST00000592333 LRRIQ4A6NIV6 560 aa20.87■□□□□ 0.93
CCDC43-205ENST00000592333 SPDYE4A6NLX3 237 aa20.87■□□□□ 0.93
CCDC43-205ENST00000592333 TEX28O15482 410 aa20.87■□□□□ 0.93
CCDC43-205ENST00000592333 MED24O75448 989 aa20.87■□□□□ 0.93
CCDC43-205ENST00000592333 GLUD1P00367 558 aa20.87■□□□□ 0.93
CCDC43-205ENST00000592333 SSBP05455 408 aaKnown RBP eCLIP20.87■□□□□ 0.93
CCDC43-205ENST00000592333 PDIA5Q14554 519 aa20.87■□□□□ 0.93
CCDC43-205ENST00000592333 USP41Q3LFD5 358 aa20.87■□□□□ 0.93
CCDC43-205ENST00000592333 NOSTRINQ8IVI9 506 aa20.87■□□□□ 0.93
CCDC43-205ENST00000592333 PRSS33Q8NF86 280 aa20.87■□□□□ 0.93
CCDC43-205ENST00000592333 CDH22Q9UJ99 828 aa20.87■□□□□ 0.93
CCDC43-205ENST00000592333 TDRD15B5MCY1 1934 aaKnown RBP20.86■□□□□ 0.93
CCDC43-205ENST00000592333 N4BP3O15049 544 aa20.86■□□□□ 0.93
CCDC43-205ENST00000592333 B4GALT5O43286 388 aa20.86■□□□□ 0.93
CCDC43-205ENST00000592333 BRD1O95696 1058 aa20.86■□□□□ 0.93
CCDC43-205ENST00000592333 SP100P23497 879 aaPredicted RBP20.86■□□□□ 0.93
CCDC43-205ENST00000592333 NAMPTP43490 491 aa20.86■□□□□ 0.93
CCDC43-205ENST00000592333 FXR2P51116 673 aaKnown RBP eCLIP20.86■□□□□ 0.93
CCDC43-205ENST00000592333 MAPK6Q16659 721 aa20.86■□□□□ 0.93
CCDC43-205ENST00000592333 IER5LQ5T953 404 aa20.86■□□□□ 0.93
CCDC43-205ENST00000592333 PADI6Q6TGC4 694 aa20.86■□□□□ 0.93
CCDC43-205ENST00000592333 STAMQ92783 540 aa20.86■□□□□ 0.93
CCDC43-205ENST00000592333 LIMD1Q9UGP4 676 aa20.86■□□□□ 0.93
CCDC43-205ENST00000592333 ADAM28Q9UKQ2 775 aa20.86■□□□□ 0.93
CCDC43-205ENST00000592333 NOL7Q9UMY1 257 aaKnown RBP20.86■□□□□ 0.93
CCDC43-205ENST00000592333 DENND4AQ7Z401 1863 aa20.86■□□□□ 0.93
CCDC43-205ENST00000592333 ARHGEF35A5YM69 484 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 ACKR2O00590 384 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 SEC24BO95487 1268 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 NPTXRO95502 500 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 WEE2P0C1S8 567 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 EFNA5P52803 228 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 TUSC3Q13454 348 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 TTC38Q5R3I4 469 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 FUT10Q6P4F1 479 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 CCDC83Q8IWF9 413 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 ADPGKQ9BRR6 497 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 APOL6Q9BWW8 343 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 RAB34Q9BZG1 259 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 GPRC5CQ9NQ84 441 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 MAN1C1Q9NR34 630 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 IGSF9Q9P2J2 1179 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 PARP2Q9UGN5 583 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 KMT2EQ8IZD2 1858 aa20.85■□□□□ 0.93
CCDC43-205ENST00000592333 C2CD2LO14523 706 aa20.84■□□□□ 0.93
CCDC43-205ENST00000592333 AKAP5P24588 427 aa20.84■□□□□ 0.93
CCDC43-205ENST00000592333 U2AF2P26368 475 aaKnown RBP eCLIP20.84■□□□□ 0.93
CCDC43-205ENST00000592333 FOSBP53539 338 aa20.84■□□□□ 0.93
CCDC43-205ENST00000592333 PRPF4BQ13523 1007 aaKnown RBP20.84■□□□□ 0.93
CCDC43-205ENST00000592333 GNL2Q13823 731 aaKnown RBP20.84■□□□□ 0.93
CCDC43-205ENST00000592333 ZNF174Q15697 407 aa20.84■□□□□ 0.93
CCDC43-205ENST00000592333 TAS1R1Q7RTX1 841 aa20.84■□□□□ 0.93
CCDC43-205ENST00000592333 FAM184AQ8NB25 1140 aa20.84■□□□□ 0.93
CCDC43-205ENST00000592333 KIFAP3Q92845 792 aa20.84■□□□□ 0.93
CCDC43-205ENST00000592333 WDR6Q9NNW5 1121 aaKnown RBP20.84■□□□□ 0.93
CCDC43-205ENST00000592333 ZDHHC7Q9NXF8 308 aa20.84■□□□□ 0.93
CCDC43-205ENST00000592333 PHLPP2Q6ZVD8 1323 aa20.83■□□□□ 0.93
CCDC43-205ENST00000592333 MYO10Q9HD67 2058 aa20.83■□□□□ 0.93
CCDC43-205ENST00000592333 LAD1O00515 517 aa20.83■□□□□ 0.93
CCDC43-205ENST00000592333 GUCY1B3Q02153 619 aa20.83■□□□□ 0.93
CCDC43-205ENST00000592333 TCF15Q12870 199 aa20.83■□□□□ 0.93
CCDC43-205ENST00000592333 ELAVL2Q12926 359 aaKnown RBP20.83■□□□□ 0.93
CCDC43-205ENST00000592333 KANK3Q6NY19 840 aa20.83■□□□□ 0.93
CCDC43-205ENST00000592333 PDXDC1Q6P996 788 aa20.83■□□□□ 0.93
CCDC43-205ENST00000592333 POTEGQ6S5H5 508 aa20.83■□□□□ 0.93
CCDC43-205ENST00000592333 APBB1IPQ7Z5R6 666 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms