RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 VPS52Q8N1B4 723 aa23.54■■□□□ 1.36
LRP3-202ENST00000590275 MRPL43Q8N983 215 aaKnown RBP23.54■■□□□ 1.36
LRP3-202ENST00000590275 FOXD4L4Q8WXT5 416 aaPredicted RBP23.54■■□□□ 1.36
LRP3-202ENST00000590275 RSPH1Q8WYR4 309 aa23.54■■□□□ 1.36
LRP3-202ENST00000590275 RABGGTAQ92696 567 aa23.54■■□□□ 1.36
LRP3-202ENST00000590275 PTPRHQ9HD43 1115 aa23.54■■□□□ 1.36
LRP3-202ENST00000590275 ENTPD7Q9NQZ7 604 aa23.54■■□□□ 1.36
LRP3-202ENST00000590275 PUF60Q9UHX1 559 aaKnown RBP23.54■■□□□ 1.36
LRP3-202ENST00000590275 TNFRSF10AO00220 468 aa23.53■■□□□ 1.36
LRP3-202ENST00000590275 PTGESO14684 152 aa23.53■■□□□ 1.36
LRP3-202ENST00000590275 N4BP3O15049 544 aa23.53■■□□□ 1.36
LRP3-202ENST00000590275 NCK2O43639 380 aa23.53■■□□□ 1.36
LRP3-202ENST00000590275 IGFBP6P24592 240 aaPredicted RBP23.53■■□□□ 1.36
LRP3-202ENST00000590275 UBA7P41226 1012 aa23.53■■□□□ 1.36
LRP3-202ENST00000590275 DHX8Q14562 1220 aaKnown RBP23.53■■□□□ 1.36
LRP3-202ENST00000590275 DDX53Q86TM3 631 aaKnown RBP23.53■■□□□ 1.36
LRP3-202ENST00000590275 CEP120Q8N960 986 aa23.53■■□□□ 1.36
LRP3-202ENST00000590275 SPRYD3Q8NCJ5 442 aa23.53■■□□□ 1.36
LRP3-202ENST00000590275 FEZF2Q8TBJ5 459 aa23.53■■□□□ 1.36
LRP3-202ENST00000590275 TMEM169Q96HH4 297 aa23.53■■□□□ 1.36
LRP3-202ENST00000590275 CDK5RAP3Q96JB5 506 aa23.53■■□□□ 1.36
LRP3-202ENST00000590275 UBN1Q9NPG3 1134 aa23.53■■□□□ 1.36
LRP3-202ENST00000590275 PARP2Q9UGN5 583 aa23.53■■□□□ 1.36
LRP3-202ENST00000590275 PRG3Q9Y2Y8 225 aaPredicted RBP23.53■■□□□ 1.36
LRP3-202ENST00000590275 SRPRBQ9Y5M8 271 aaKnown RBP23.53■■□□□ 1.36
LRP3-202ENST00000590275 MEFVO15553 781 aaPredicted RBP23.52■■□□□ 1.36
LRP3-202ENST00000590275 MBTPS2O43462 519 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 RECQL4O94761 1208 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 EFNA5P52803 228 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 NAB2Q15742 525 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 ATF7IP2Q5U623 682 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 PDE12Q6L8Q7 609 aaKnown RBP23.52■■□□□ 1.36
LRP3-202ENST00000590275 HSCBQ8IWL3 235 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 TMEM161BQ8NDZ6 487 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 RAD54LQ92698 747 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 DRC1Q96MC2 740 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 ACO2Q99798 780 aaKnown RBP23.52■■□□□ 1.36
LRP3-202ENST00000590275 PAAF1Q9BRP4 392 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 TMEM175Q9BSA9 504 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 NTPCRQ9BSD7 190 aaKnown RBP23.52■■□□□ 1.36
LRP3-202ENST00000590275 TARS2Q9BW92 718 aaKnown RBP23.52■■□□□ 1.36
LRP3-202ENST00000590275 CCSER1Q9C0I3 900 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 TMEM134Q9H6X4 195 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 NGRNQ9NPE2 291 aaKnown RBP23.52■■□□□ 1.36
LRP3-202ENST00000590275 KMT5AQ9NQR1 393 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 KANSL3Q9P2N6 904 aa23.52■■□□□ 1.36
LRP3-202ENST00000590275 A0A087X0B3 334 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 K7ERI5 159 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 SLC26A4O43511 780 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 CXCL14O95715 111 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 PLS3P13797 630 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 NDUFV1P49821 464 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 DMP1Q13316 513 aaPredicted RBP23.51■■□□□ 1.35
LRP3-202ENST00000590275 GPBP1Q86WP2 473 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 FAM178BQ8IXR5 827 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 KCTD17Q8N5Z5 321 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 ZBTB45Q96K62 511 aaPredicted RBP23.51■■□□□ 1.35
LRP3-202ENST00000590275 REEP2Q9BRK0 252 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 CDT1Q9H211 546 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 FAN1Q9Y2M0 1017 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 PHLPP2Q6ZVD8 1323 aa23.51■■□□□ 1.35
LRP3-202ENST00000590275 CLASP2O75122 1294 aaKnown RBP23.5■■□□□ 1.35
LRP3-202ENST00000590275 ALDH2P05091 517 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 CTSAP10619 480 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 OR1G1P47890 313 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 SLC39A14Q15043 492 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 LLGL2Q6P1M3 1020 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 RNF168Q8IYW5 571 aaPredicted RBP23.5■■□□□ 1.35
LRP3-202ENST00000590275 SPIRE2Q8WWL2 714 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 CALML4Q96GE6 196 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 FIZ1Q96SL8 496 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 TIPINQ9BVW5 301 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 HAPLN2Q9GZV7 340 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 ZSCAN16Q9H4T2 348 aaPredicted RBP23.5■■□□□ 1.35
LRP3-202ENST00000590275 TFIP11Q9UBB9 837 aaKnown RBP23.5■■□□□ 1.35
LRP3-202ENST00000590275 CD207Q9UJ71 328 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 CDH22Q9UJ99 828 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 TNFSF13BQ9Y275 285 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 GDAQ9Y2T3 454 aa23.5■■□□□ 1.35
LRP3-202ENST00000590275 BDP1A6H8Y1 2624 aa23.49■■□□□ 1.35
LRP3-202ENST00000590275 LILRB3O75022 631 aa23.49■■□□□ 1.35
LRP3-202ENST00000590275 MAPTP10636 758 aaKnown RBP23.49■■□□□ 1.35
LRP3-202ENST00000590275 PROZP22891 400 aa23.49■■□□□ 1.35
LRP3-202ENST00000590275 NASPP49321 788 aaPredicted RBP23.49■■□□□ 1.35
LRP3-202ENST00000590275 GIT2Q14161 759 aa23.49■■□□□ 1.35
LRP3-202ENST00000590275 SMC1AQ14683 1233 aaKnown RBP23.49■■□□□ 1.35
LRP3-202ENST00000590275 PTPN14Q15678 1187 aa23.49■■□□□ 1.35
LRP3-202ENST00000590275 TMEM132AQ24JP5 1023 aa23.49■■□□□ 1.35
LRP3-202ENST00000590275 SYCE2Q6PIF2 218 aa23.49■■□□□ 1.35
LRP3-202ENST00000590275 SMRP1Q8NCR6 262 aa23.49■■□□□ 1.35
LRP3-202ENST00000590275 PPP2R3CQ969Q6 453 aa23.49■■□□□ 1.35
LRP3-202ENST00000590275 FAM193BQ96PV7 902 aaPredicted RBP23.49■■□□□ 1.35
LRP3-202ENST00000590275 MORC2Q9Y6X9 1032 aaPredicted RBP23.49■■□□□ 1.35
LRP3-202ENST00000590275 COASYQ13057 564 aa23.48■■□□□ 1.35
LRP3-202ENST00000590275 TMEM184AQ6ZMB5 413 aa23.48■■□□□ 1.35
LRP3-202ENST00000590275 LINC00301Q8NCQ3 95 aa23.48■■□□□ 1.35
LRP3-202ENST00000590275 CDCA3Q99618 268 aaPredicted RBP23.48■■□□□ 1.35
LRP3-202ENST00000590275 S1PR5Q9H228 398 aa23.48■■□□□ 1.35
LRP3-202ENST00000590275 C17orf75Q9HAS0 396 aa23.48■■□□□ 1.35
LRP3-202ENST00000590275 HCFC2Q9Y5Z7 792 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms