RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 GIT1Q9Y2X7 761 aa20.07■□□□□ 0.8
DDX39A-212ENST00000590260 HIDE1A8MVS5 230 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 PTGESO14684 152 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 SPTLC2O15270 562 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 MEFVO15553 781 aaPredicted RBP20.06■□□□□ 0.8
DDX39A-212ENST00000590260 TBX10O75333 385 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 GLP2RO95838 553 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 EFEMP2O95967 443 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 MAPTP10636 758 aaKnown RBP20.06■□□□□ 0.8
DDX39A-212ENST00000590260 PROZP22891 400 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 STK38Q15208 465 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 NAB2Q15742 525 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 AXDND1Q5T1B0 1012 aaPredicted RBP20.06■□□□□ 0.8
DDX39A-212ENST00000590260 ATF7IP2Q5U623 682 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 CEP120Q8N960 986 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 VN1R2Q8NFZ6 395 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.06■□□□□ 0.8
DDX39A-212ENST00000590260 URGCPQ8TCY9 931 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 IGSF21Q96ID5 467 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 TRIM6Q9C030 488 aaPredicted RBP20.06■□□□□ 0.8
DDX39A-212ENST00000590260 HAPLN2Q9GZV7 340 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 UBN1Q9NPG3 1134 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 ODF2LQ9ULJ1 636 aa20.06■□□□□ 0.8
DDX39A-212ENST00000590260 BRWD1Q9NSI6 2320 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 TCF20Q9UGU0 1960 aaKnown RBP20.05■□□□□ 0.8
DDX39A-212ENST00000590260 NRP1O14786 923 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 PPP6R2O75170 966 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 YEATS4O95619 227 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 BRD1O95696 1058 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 PPM1AP35813 382 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 ADAM15Q13444 863 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 PLPP4Q5VZY2 271 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 SHC4Q6S5L8 630 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 RBM23Q86U06 439 aaKnown RBP20.05■□□□□ 0.8
DDX39A-212ENST00000590260 KCNN1Q92952 543 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 ZBTB45Q96K62 511 aaPredicted RBP20.05■□□□□ 0.8
DDX39A-212ENST00000590260 ZNF396Q96N95 335 aaPredicted RBP20.05■□□□□ 0.8
DDX39A-212ENST00000590260 PANK2Q9BZ23 570 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 CDT1Q9H211 546 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 IGFLR1Q9H665 355 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 CACNG4Q9UBN1 327 aa20.05■□□□□ 0.8
DDX39A-212ENST00000590260 MYMKA6NI61 221 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 H3BQ06 376 aaPredicted RBP20.04■□□□□ 0.8
DDX39A-212ENST00000590260 PER2O15055 1255 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 RECQL4O94761 1208 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 KCNA5P22460 613 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 NRIP1P48552 1158 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 ALDH7A1P49419 539 aaKnown RBP20.04■□□□□ 0.8
DDX39A-212ENST00000590260 DNM1Q05193 864 aaKnown RBP20.04■□□□□ 0.8
DDX39A-212ENST00000590260 RNASELQ05823 741 aaKnown RBP20.04■□□□□ 0.8
DDX39A-212ENST00000590260 KCNC3Q14003 757 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 E2F4Q16254 413 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 DNAJC19Q96DA6 116 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 TCF25Q9BQ70 676 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 TMEM175Q9BSA9 504 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 ZBP1Q9H171 429 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 CLDND1Q9NY35 253 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 KANSL3Q9P2N6 904 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 STK17AQ9UEE5 414 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 DAXXQ9UER7 740 aaPredicted RBP20.04■□□□□ 0.8
DDX39A-212ENST00000590260 PARP2Q9UGN5 583 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 RBM19Q9Y4C8 960 aaKnown RBP20.04■□□□□ 0.8
DDX39A-212ENST00000590260 ZMYM2Q9UBW7 1377 aa20.04■□□□□ 0.8
DDX39A-212ENST00000590260 LEXMQ3ZCV2 418 aa20.03■□□□□ 0.8
DDX39A-212ENST00000590260 RRAGBQ5VZM2 374 aa20.03■□□□□ 0.8
DDX39A-212ENST00000590260 RASSF8Q8NHQ8 419 aa20.03■□□□□ 0.8
DDX39A-212ENST00000590260 AUTS2Q8WXX7 1259 aa20.03■□□□□ 0.8
DDX39A-212ENST00000590260 NECAB3Q96P71 396 aaPredicted RBP20.03■□□□□ 0.8
DDX39A-212ENST00000590260 PAAF1Q9BRP4 392 aa20.03■□□□□ 0.8
DDX39A-212ENST00000590260 CLEC1BQ9P126 229 aa20.03■□□□□ 0.8
DDX39A-212ENST00000590260 C2orf71A6NGG8 1288 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 DLL1O00548 723 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 PDIA4P13667 645 aaKnown RBP20.02■□□□□ 0.8
DDX39A-212ENST00000590260 IGFBP6P24592 240 aaPredicted RBP20.02■□□□□ 0.8
DDX39A-212ENST00000590260 DUSP6Q16828 381 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 DCAF4L1Q3SXM0 396 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 TAS1R1Q7RTX1 841 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 HAUS6Q7Z4H7 955 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 DDX53Q86TM3 631 aaKnown RBP20.02■□□□□ 0.8
DDX39A-212ENST00000590260 RNF168Q8IYW5 571 aaPredicted RBP20.02■□□□□ 0.8
DDX39A-212ENST00000590260 EFHBQ8N7U6 833 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 MICAL1Q8TDZ2 1067 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 RABGGTAQ92696 567 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 TMEM169Q96HH4 297 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 MSLNLQ96KJ4 702 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 MRPL4Q9BYD3 311 aaKnown RBP20.02■□□□□ 0.8
DDX39A-212ENST00000590260 CCDC39Q9UFE4 941 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 GDAQ9Y2T3 454 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 TRIP11Q15643 1979 aa20.02■□□□□ 0.8
DDX39A-212ENST00000590260 NMT1P30419 496 aaKnown RBP20.01■□□□□ 0.79
DDX39A-212ENST00000590260 KRT17Q04695 432 aa20.01■□□□□ 0.79
DDX39A-212ENST00000590260 GRIK3Q13003 919 aa20.01■□□□□ 0.79
DDX39A-212ENST00000590260 TMEM132AQ24JP5 1023 aa20.01■□□□□ 0.79
DDX39A-212ENST00000590260 SLC39A4Q6P5W5 647 aa20.01■□□□□ 0.79
DDX39A-212ENST00000590260 DYMQ7RTS9 669 aa20.01■□□□□ 0.79
DDX39A-212ENST00000590260 ZBTB33Q86T24 672 aa20.01■□□□□ 0.79
DDX39A-212ENST00000590260 VPS52Q8N1B4 723 aa20.01■□□□□ 0.79
DDX39A-212ENST00000590260 PDILTQ8N807 584 aa20.01■□□□□ 0.79
DDX39A-212ENST00000590260 ADAMTS19Q8TE59 1207 aa20.01■□□□□ 0.79
DDX39A-212ENST00000590260 DDX12PQ92771 950 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms