RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ANKZF1Q9H8Y5 726 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 SIK3Q9Y2K2 1263 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 MMEP08473 750 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 TATDN1Q6P1N9 297 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 CCDC137Q6PK04 289 aaKnown RBP15.6■□□□□ 0.09
RETREG3-208ENST00000589797 CCDC13Q8IYE1 715 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 NME8Q8N427 588 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 MIS12Q9H081 205 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 MRPL47Q9HD33 250 aaKnown RBP15.6■□□□□ 0.09
RETREG3-208ENST00000589797 FAM114A2Q9NRY5 505 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 REXO2Q9Y3B8 237 aaKnown RBP15.6■□□□□ 0.09
RETREG3-208ENST00000589797 FAM169AQ9Y6X4 670 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 DYNC1LI2O43237 492 aaPredicted RBP15.59■□□□□ 0.09
RETREG3-208ENST00000589797 SASH3O75995 380 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 SNHG28P0DPA3 235 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 ATP11AP98196 1134 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 MMS22LQ6ZRQ5 1243 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 SLC47A2Q86VL8 602 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 FBXO16Q8IX29 292 aaPredicted RBP15.59■□□□□ 0.09
RETREG3-208ENST00000589797 LRRC15Q8TF66 581 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 TMEM117Q9H0C3 514 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 RASSF4Q9H2L5 321 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 CYP26B1Q9NR63 512 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 ROBO1Q9Y6N7 1651 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 LRRC37A3O60309 1634 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 M0QZ92 97 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 SLC16A3O15427 465 aaKnown RBP15.59■□□□□ 0.09
RETREG3-208ENST00000589797 ATP2A2P16615 1042 aaKnown RBP15.59■□□□□ 0.09
RETREG3-208ENST00000589797 PSMA2P25787 234 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 NCOA4Q13772 614 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 BEND6Q5SZJ8 279 aaPredicted RBP15.59■□□□□ 0.09
RETREG3-208ENST00000589797 MOXD1Q6UVY6 613 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 GDAP1Q8TB36 358 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 ETNPPLQ8TBG4 499 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 WDR91A4D1P6 747 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 PRKCBP05771 671 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 TTLL4Q14679 1199 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 KIAA1755Q5JYT7 1200 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 KCTD6Q8NC69 237 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 EXOC4Q96A65 974 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 INTS9Q9NV88 658 aaKnown RBP15.59■□□□□ 0.09
RETREG3-208ENST00000589797 ZNF446Q9NWS9 450 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 HEY1Q9Y5J3 304 aa15.59■□□□□ 0.09
RETREG3-208ENST00000589797 ITGA4P13612 1032 aa15.58■□□□□ 0.09
RETREG3-208ENST00000589797 GUCY1A3Q02108 690 aa15.58■□□□□ 0.09
RETREG3-208ENST00000589797 BBS9Q3SYG4 887 aa15.58■□□□□ 0.09
RETREG3-208ENST00000589797 MTFR1LQ9H019 292 aa15.58■□□□□ 0.09
RETREG3-208ENST00000589797 A1CFQ9NQ94 594 aaKnown RBP15.58■□□□□ 0.09
RETREG3-208ENST00000589797 PARP4Q9UKK3 1724 aaKnown RBP15.58■□□□□ 0.09
RETREG3-208ENST00000589797 LDHAP00338 332 aaKnown RBP15.58■□□□□ 0.08
RETREG3-208ENST00000589797 FGFR4P22455 802 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 HHATQ5VTY9 493 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 SV2AQ7L0J3 742 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 PSMD10O75832 226 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 EZRP15311 586 aaKnown RBP15.58■□□□□ 0.08
RETREG3-208ENST00000589797 MAGOHP61326 146 aaKnown RBP15.58■□□□□ 0.08
RETREG3-208ENST00000589797 YWHAGP61981 247 aaKnown RBP eCLIP15.58■□□□□ 0.08
RETREG3-208ENST00000589797 YWHAEP62258 255 aaKnown RBP15.58■□□□□ 0.08
RETREG3-208ENST00000589797 DUOXA2Q1HG44 320 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 TRPM4Q8TD43 1214 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 PRPF31Q8WWY3 499 aaKnown RBP15.58■□□□□ 0.08
RETREG3-208ENST00000589797 P2RX7Q99572 595 aaKnown RBP15.58■□□□□ 0.08
RETREG3-208ENST00000589797 MRPL4Q9BYD3 311 aaKnown RBP15.58■□□□□ 0.08
RETREG3-208ENST00000589797 CCDC188H7C350 402 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 EIF3DO15371 548 aaKnown RBP eCLIP15.58■□□□□ 0.08
RETREG3-208ENST00000589797 RGS7P49802 495 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 MXRA7P84157 204 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 PPP2R5EQ16537 467 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 C1orf186Q6ZWK4 172 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 B4GALNT4Q76KP1 1039 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 TMEM35BQ8NCS4 154 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 JPH2Q9BR39 696 aaPredicted RBP15.58■□□□□ 0.08
RETREG3-208ENST00000589797 KIAA1683Q9H0B3 1180 aa15.58■□□□□ 0.08
RETREG3-208ENST00000589797 TAF1DQ9H5J8 278 aaPredicted RBP15.58■□□□□ 0.08
RETREG3-208ENST00000589797 ANKRD63C9JTQ0 380 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 MAP3K6O95382 1288 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 GPC3P51654 580 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 MAP1SQ66K74 1059 aaPredicted RBP15.57■□□□□ 0.08
RETREG3-208ENST00000589797 TAOK1Q7L7X3 1001 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 CCNYQ8ND76 341 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 TPCN2Q8NHX9 752 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 RBM46Q8TBY0 533 aaKnown RBP15.57■□□□□ 0.08
RETREG3-208ENST00000589797 TLR10Q9BXR5 811 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 CAPN7Q9Y6W3 813 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 GLI1P08151 1106 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 SAT1P21673 171 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 LRRC14Q15048 493 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 GJC2Q5T442 439 aaPredicted RBP15.57■□□□□ 0.08
RETREG3-208ENST00000589797 H3BQF6 201 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 RASGRF2O14827 1237 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 FDX1P10109 184 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 PSMC1P62191 440 aaKnown RBP15.57■□□□□ 0.08
RETREG3-208ENST00000589797 SMTNL2Q2TAL5 461 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 FIGNQ5HY92 759 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 ARHGEF19Q8IW93 802 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 WHAMMQ8TF30 809 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 MAIP1Q8WWC4 291 aa15.57■□□□□ 0.08
RETREG3-208ENST00000589797 F8VZ95 297 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 MYL3P08590 195 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 PTPRAP18433 802 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms