RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 RGS2P41220 211 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 ACTR2P61160 394 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 C2orf54Q08AI8 447 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 PLS1Q14651 629 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 DRAP1Q14919 205 aaPredicted RBP10.78□□□□□ -0.68
VPS25-202ENST00000589219 STXBP2Q15833 593 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 EPC2Q52LR7 807 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 GLE1Q53GS7 698 aaKnown RBP10.78□□□□□ -0.68
VPS25-202ENST00000589219 XKR3Q5GH77 459 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 UTP14CQ5TAP6 766 aaKnown RBP10.78□□□□□ -0.68
VPS25-202ENST00000589219 MEI1Q5TIA1 1274 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 NFRKBQ6P4R8 1299 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 LBX2Q6XYB7 198 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 ANO5Q75V66 913 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.78□□□□□ -0.68
VPS25-202ENST00000589219 MAEAQ7L5Y9 396 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 PLEKHH3Q7Z736 793 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 RIOX2Q8IUF8 465 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 TMEM161BQ8NDZ6 487 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 TMC2Q8TDI7 906 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 LMBR1Q8WVP7 490 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 CEP170P1Q96L14 293 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 IFT74Q96LB3 600 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 CBWD1Q9BRT8 395 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 SYT11Q9BT88 431 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 IKZF4Q9H2S9 585 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 VIPAS39Q9H9C1 493 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 TXNRD2Q9NNW7 524 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 KMT5AQ9NQR1 393 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 RBPJLQ9UBG7 517 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 SEPT9Q9UHD8 586 aaPredicted RBP10.78□□□□□ -0.68
VPS25-202ENST00000589219 TBX20Q9UMR3 447 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 PPME1Q9Y570 386 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 EMSYQ7Z589 1322 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 MYH11P35749 1972 aa10.77□□□□□ -0.68
VPS25-202ENST00000589219 DENND3A2RUS2 1198 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 CCDC169A6NNP5 214 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 PDE2AO00408 941 aaPredicted RBP10.77□□□□□ -0.69
VPS25-202ENST00000589219 DDX3XO00571 662 aaKnown RBP eCLIP10.77□□□□□ -0.699e-14■■■□□ 17.4
VPS25-202ENST00000589219 ZNF185O15231 689 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 SASH3O75995 380 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 STBD1O95210 358 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.69
VPS25-202ENST00000589219 GARTP22102 1010 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 TNFRSF8P28908 595 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 NPTX2P47972 431 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 ENOX2Q16206 610 aaKnown RBP10.77□□□□□ -0.69
VPS25-202ENST00000589219 GJB7Q6PEY0 223 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 ABHD15Q6UXT9 468 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 GPR142Q7Z601 462 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 SPATA4Q8NEY3 305 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 COG1Q8WTW3 980 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 UBE2Q2Q8WVN8 375 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 RFFLQ8WZ73 363 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 PAWRQ96IZ0 340 aaKnown RBP10.77□□□□□ -0.69
VPS25-202ENST00000589219 PBKQ96KB5 322 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 FAM81BQ96LP2 452 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 MPHOSPH6Q99547 160 aaKnown RBP10.77□□□□□ -0.69
VPS25-202ENST00000589219 NTPCRQ9BSD7 190 aaKnown RBP10.77□□□□□ -0.69
VPS25-202ENST00000589219 PACSIN1Q9BY11 444 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 GPR88Q9GZN0 384 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 ABCB6Q9NP58 842 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 GPRC5CQ9NQ84 441 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 CYP26B1Q9NR63 512 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 L1RE1Q9UN81 338 aa10.77□□□□□ -0.69
VPS25-202ENST00000589219 LCTP09848 1927 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 LRRC37A2A6NM11 1700 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 TMEM150BA6NC51 233 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 HAX1O00165 279 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 NCK2O43639 380 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 ZNF862O60290 1169 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 RGS20O76081 388 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 CLSTN1O94985 981 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 FTCDO95954 541 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 OATP04181 439 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 EDNRBP24530 442 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 ALDH5A1P51649 535 aaPredicted RBP10.76□□□□□ -0.69
VPS25-202ENST00000589219 TNNC1P63316 161 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 SMC1AQ14683 1233 aaKnown RBP10.76□□□□□ -0.69
VPS25-202ENST00000589219 RPS6KA1Q15418 735 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 SNRNP35Q16560 246 aaKnown RBP10.76□□□□□ -0.69
VPS25-202ENST00000589219 Q3C1V9 767 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 MORN1Q5T089 497 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 MAP3K21Q5TCX8 1036 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 CCDC60Q8IWA6 550 aaPredicted RBP10.76□□□□□ -0.69
VPS25-202ENST00000589219 ANKRD35Q8N283 1001 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 LRRC57Q8N9N7 239 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 SLC30A5Q8TAD4 765 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 OLIG1Q8TAK6 271 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 LMO3Q8TAP4 145 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 LNX1Q8TBB1 728 aaPredicted RBP10.76□□□□□ -0.69
VPS25-202ENST00000589219 CTNNBL1Q8WYA6 563 aaPredicted RBP10.76□□□□□ -0.69
VPS25-202ENST00000589219 TRIB2Q92519 343 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 USP6NLQ92738 828 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 FBXL18Q96ME1 805 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 APBA2Q99767 749 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 PORCNQ9H237 461 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 PCIF1Q9H4Z3 704 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 KIAA1586Q9HCI6 787 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 TMEM8AQ9HCN3 771 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms