RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 SLC2A4RGQ9NR83 387 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.85■□□□□ 0.29
SF3A2-204ENST00000589118 RGL1Q9NZL6 768 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 SSX2IPQ9Y2D8 614 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 NOTCH4Q99466 2003 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 A0A087WWV3 80 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 ZMYND10O75800 440 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 QARSP47897 775 aaKnown RBP16.84■□□□□ 0.29
SF3A2-204ENST00000589118 UBXN2BQ14CS0 331 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 INF2Q27J81 1249 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 RTP2Q5QGT7 225 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 ZC3H14Q6PJT7 736 aaKnown RBP16.84■□□□□ 0.29
SF3A2-204ENST00000589118 FERMT3Q86UX7 667 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 ITFG1Q8TB96 612 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 PSPC1Q8WXF1 523 aaKnown RBP16.84■□□□□ 0.29
SF3A2-204ENST00000589118 SLC7A3Q8WY07 619 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 NXPE3Q969Y0 559 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 MBOAT7Q96N66 472 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 KXD1Q9BQD3 176 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 COLEC11Q9BWP8 271 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 RHOBTB2Q9BYZ6 727 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 PLEKHA4Q9H4M7 779 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 DDX25Q9UHL0 483 aaKnown RBP16.84■□□□□ 0.29
SF3A2-204ENST00000589118 VAV3Q9UKW4 847 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 PCDHA4Q9UN74 947 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
SF3A2-204ENST00000589118 KMT2BQ9UMN6 2715 aaPredicted RBP16.84■□□□□ 0.29
SF3A2-204ENST00000589118 DCDC2BA2VCK2 349 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 FAM170BA6NMN3 283 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 M0R2N6 131 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 CCL16O15467 120 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 ADAM12O43184 909 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 B4GALT5O43286 388 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 KINO60870 393 aaKnown RBP16.83■□□□□ 0.28
SF3A2-204ENST00000589118 IFNAR1P17181 557 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 IGFBP6P24592 240 aaPredicted RBP16.83■□□□□ 0.28
SF3A2-204ENST00000589118 PDIA3P30101 505 aaKnown RBP16.83■□□□□ 0.28
SF3A2-204ENST00000589118 ATXN1P54253 815 aaKnown RBP16.83■□□□□ 0.28
SF3A2-204ENST00000589118 NID2Q14112 1375 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 CTTNQ14247 550 aaKnown RBP16.83■□□□□ 0.28
SF3A2-204ENST00000589118 KRT32Q14532 448 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 EMC2Q15006 297 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 NPY5RQ15761 445 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 SLC44A4Q53GD3 710 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 VARS2Q5ST30 1063 aaKnown RBP16.83■□□□□ 0.28
SF3A2-204ENST00000589118 POTEHQ6S545 545 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 CYP26C1Q6V0L0 522 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 BLIDQ8IZY5 108 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 DYDC2Q96IM9 177 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 HCFC1R1Q9NWW0 138 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 NCDNQ9UBB6 729 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 STK39Q9UEW8 545 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 POLIQ9UNA4 740 aa16.83■□□□□ 0.28
SF3A2-204ENST00000589118 EPG5Q9HCE0 2579 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 KANSL1LA0AUZ9 987 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 ERLIN2O94905 339 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 CYP4A11Q02928 519 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 USP41Q3LFD5 358 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 XKR9Q5GH70 373 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 CEP57Q86XR8 500 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 ASAP3Q8TDY4 903 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 HDAC7Q8WUI4 952 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 ING5Q8WYH8 240 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 FGF13Q92913 245 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 CLSTN3Q9BQT9 956 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 JPH2Q9BR39 696 aaPredicted RBP16.82■□□□□ 0.28
SF3A2-204ENST00000589118 CSRNP2Q9H175 543 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 XPNPEP1Q9NQW7 623 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 ZDHHC7Q9NXF8 308 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 DPP7Q9UHL4 492 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 CDH7Q9ULB5 785 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 KCNJ14Q9UNX9 436 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 VWA8A3KMH1 1905 aa16.82■□□□□ 0.28
SF3A2-204ENST00000589118 INO80B-WBP1J3KQ70 363 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 LAMTOR5O43504 91 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 TADA2AO75478 443 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 PAPLNO95428 1278 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 NPTXRO95502 500 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 HMGB1P09429 215 aaKnown RBP16.81■□□□□ 0.28
SF3A2-204ENST00000589118 ARF4P18085 180 aaPredicted RBP16.81■□□□□ 0.28
SF3A2-204ENST00000589118 RPS6KB1P23443 525 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 MLF2Q15773 248 aaPredicted RBP16.81■□□□□ 0.28
SF3A2-204ENST00000589118 AMHR2Q16671 573 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 ELMSAN1Q6PJG2 1045 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 BLOC1S2Q6QNY1 142 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 CNNM3Q8NE01 707 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 LXNQ9BS40 222 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 PLA2G2FQ9BZM2 168 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 UBN1Q9NPG3 1134 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 GJB4Q9NTQ9 266 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 FNIP2Q9P278 1114 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 PARP2Q9UGN5 583 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 ADAM28Q9UKQ2 775 aa16.81■□□□□ 0.28
SF3A2-204ENST00000589118 P4HBP07237 508 aaKnown RBP16.8■□□□□ 0.28
SF3A2-204ENST00000589118 YWHABP31946 246 aaKnown RBP16.8■□□□□ 0.28
SF3A2-204ENST00000589118 PTENP60484 403 aa16.8■□□□□ 0.28
SF3A2-204ENST00000589118 MBTD1Q05BQ5 628 aa16.8■□□□□ 0.28
SF3A2-204ENST00000589118 PPP2R5CQ13362 524 aa16.8■□□□□ 0.28
SF3A2-204ENST00000589118 NCAPH2Q6IBW4 605 aa16.8■□□□□ 0.28
SF3A2-204ENST00000589118 NOTUMQ6P988 496 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms