RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 PLEKHO2Q8TD55 490 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 KAT2BQ92831 832 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 LENG1Q96BZ8 264 aaPredicted RBP13.1□□□□□ -0.31
CCBE1-203ENST00000589116 ARMC5Q96C12 935 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 C16orf45Q96MC5 204 aaPredicted RBP13.1□□□□□ -0.31
CCBE1-203ENST00000589116 CHP1Q99653 195 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 ACO2Q99798 780 aaKnown RBP13.1□□□□□ -0.31
CCBE1-203ENST00000589116 FAM213AQ9BRX8 229 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 MSTO1Q9BUK6 570 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 SIX2Q9NPC8 291 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 NLRC4Q9NPP4 1024 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 PRMT7Q9NVM4 692 aaPredicted RBP13.1□□□□□ -0.31
CCBE1-203ENST00000589116 AKT3Q9Y243 479 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 PTPN22Q9Y2R2 807 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 EPN1Q9Y6I3 576 aaPredicted RBP13.1□□□□□ -0.31
CCBE1-203ENST00000589116 SSU72P8A0A1W2PR75 194 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 CLDN3O15551 220 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 ZEB2O60315 1214 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 EDN1P05305 212 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 SMIM10L2AP0DMW4 78 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 SMIM10L2BP0DMW5 78 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 PSEN2P49810 448 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 GJA9P57773 515 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 NKX3-2P78367 333 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 MBTD1Q05BQ5 628 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 PPP3CAQ08209 521 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 PSMD6Q15008 389 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 MARCH8Q5T0T0 291 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 KRT39Q6A163 491 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 REXO1L1PQ8IX06 675 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 TRPV1Q8NER1 839 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 LMBR1Q8WVP7 490 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 VTI1AQ96AJ9 217 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 PRIMPOLQ96LW4 560 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 SPAG5Q96R06 1193 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 INTS2Q9H0H0 1204 aaKnown RBP13.09□□□□□ -0.31
CCBE1-203ENST00000589116 UPF3AQ9H1J1 476 aaKnown RBP13.09□□□□□ -0.31
CCBE1-203ENST00000589116 TMEM8AQ9HCN3 771 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 AIPL1Q9NZN9 384 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 ANKFY1Q9P2R3 1169 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 USP20Q9Y2K6 914 aa13.09□□□□□ -0.31
CCBE1-203ENST00000589116 KIAA0100Q14667 2235 aaKnown RBP13.09□□□□□ -0.31
CCBE1-203ENST00000589116 SMIM35A0A1B0GVV1 85 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 MBLAC1A4D2B0 266 aaPredicted RBP13.08□□□□□ -0.31
CCBE1-203ENST00000589116 LRRIQ3A6PVS8 624 aaPredicted RBP13.08□□□□□ -0.31
CCBE1-203ENST00000589116 INO80B-WBP1J3KQ70 363 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 SEPT4O43236 478 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 IPO7O95373 1038 aaKnown RBP13.08□□□□□ -0.31
CCBE1-203ENST00000589116 GNRH1P01148 92 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 ACTN1P12814 892 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.31
CCBE1-203ENST00000589116 CLDN10P78369 228 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 MCL1Q07820 350 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.31
CCBE1-203ENST00000589116 PRPF4BQ13523 1007 aaKnown RBP13.08□□□□□ -0.31
CCBE1-203ENST00000589116 SLC9C1Q4G0N8 1177 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 EPC2Q52LR7 807 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 NFRKBQ6P4R8 1299 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 TSHZ1Q6ZSZ6 1077 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 EHBP1Q8NDI1 1231 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 DESI2Q9BSY9 194 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 INO80BQ9C086 356 aaPredicted RBP13.08□□□□□ -0.31
CCBE1-203ENST00000589116 HAPLN2Q9GZV7 340 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 TMEM117Q9H0C3 514 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 NHEJ1Q9H9Q4 299 aaPredicted RBP13.08□□□□□ -0.31
CCBE1-203ENST00000589116 IFT122Q9HBG6 1241 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 SPC25Q9HBM1 224 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 SETD4Q9NVD3 440 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 APEX2Q9UBZ4 518 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 COQ4Q9Y3A0 265 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 FHOD1Q9Y613 1164 aa13.08□□□□□ -0.31
CCBE1-203ENST00000589116 EIF3CLB5ME19 914 aaKnown RBP13.08□□□□□ -0.32
CCBE1-203ENST00000589116 SERPING1P05155 500 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 GJB1P08034 283 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 MYL3P08590 195 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 TNNT1P13805 278 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 PROZP22891 400 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 GCLMP48507 274 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 JAM2P57087 298 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 NLRP11P59045 1033 aaKnown RBP13.08□□□□□ -0.32
CCBE1-203ENST00000589116 KRT83P78385 493 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 PURAQ00577 322 aaKnown RBP13.08□□□□□ -0.32
CCBE1-203ENST00000589116 RAPGEF1Q13905 1077 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 ATF7IP2Q5U623 682 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 MPZL3Q6UWV2 235 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 SRGAP1Q7Z6B7 1085 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 LMO3Q8TAP4 145 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 CCDC127Q96BQ5 260 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 ZBTB10Q96DT7 871 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 ZBTB45Q96K62 511 aaPredicted RBP13.08□□□□□ -0.32
CCBE1-203ENST00000589116 CCDC42Q96M95 316 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 EIF3CQ99613 913 aaKnown RBP13.08□□□□□ -0.32
CCBE1-203ENST00000589116 RBAKQ9NYW8 714 aaPredicted RBP13.08□□□□□ -0.32
CCBE1-203ENST00000589116 ARHGAP20Q9P2F6 1191 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 SRRDQ9UH36 339 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 TNFSF13BQ9Y275 285 aa13.08□□□□□ -0.32
CCBE1-203ENST00000589116 BZW2Q9Y6E2 419 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms