RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 USP37Q86T82 979 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 FAM114A1Q8IWE2 563 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 ZC3H3Q8IXZ2 948 aaKnown RBP18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 XXYLT1Q8NBI6 393 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 CPB2Q96IY4 423 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 MKNK1Q9BUB5 465 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 TSPYL2Q9H2G4 693 aaPredicted RBP18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 HSPBP1Q9NZL4 362 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 ANKRD63C9JTQ0 380 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 ABLIM1O14639 778 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 SLC16A3O15427 465 aaKnown RBP18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 BAIAP3O94812 1187 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 ADSSP30520 456 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 ADAM9Q13443 819 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 IKBKEQ14164 716 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 DSC3Q14574 896 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 GPNMBQ14956 572 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 GPD1LQ8N335 351 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 DBF4BQ8NFT6 615 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 RSPH1Q8WYR4 309 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 CDT1Q9H211 546 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 TMX1Q9H3N1 280 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 IL23AQ9NPF7 189 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 RGS18Q9NS28 235 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 DMAC2Q9NW81 257 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 LTBP2Q14767 1821 aa18.51■□□□□ 0.55
SCAMP4-211ENST00000588907 A0A0U1RQF3 1178 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 ABHD14A-ACY1A0A1B0GW23 586 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 TRIM49BA6NDI0 452 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 TTLL13PA6NNM8 815 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 EXTL3O43909 919 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 EXOC3O60645 756 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 ZNF623O75123 536 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 EPB41P11171 864 aaKnown RBP18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 CSF2RAP15509 400 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 ITGB8P26012 769 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 PMS1P54277 932 aaKnown RBP18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 STX17P56962 302 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 ENPEPQ07075 957 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 PSRC1Q6PGN9 363 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 SLC24A5Q71RS6 500 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 DEFB128Q7Z7B8 93 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 PGBD4Q96DM1 585 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 FBXL18Q96ME1 805 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 ADAM2Q99965 735 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 CBWD1Q9BRT8 395 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 CCDC94Q9BW85 323 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 THAP9Q9H5L6 903 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 UBN1Q9NPG3 1134 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 TOPORSQ9NS56 1045 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 FAM105AQ9NUU6 356 aa18.5■□□□□ 0.55
SCAMP4-211ENST00000588907 SCN5AQ14524 2016 aa18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 CLIC2O15247 247 aa18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 NPTXRO95502 500 aa18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 CLTAP09496 248 aa18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 PRKCSHP14314 528 aaPredicted RBP18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 PSMC2P35998 433 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 GRM5P41594 1212 aa18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 CYP2J2P51589 502 aa18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 EEF1DP3Q658K8 133 aa18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 LRRC55Q6ZSA7 311 aa18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 FILIP1Q7Z7B0 1213 aa18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 ZBTB33Q86T24 672 aa18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 DUSP9Q99956 384 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 METTL14Q9HCE5 456 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 NFE2L3Q9Y4A8 694 aa18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 PCDHB2Q9Y5E7 798 aa18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.49■□□□□ 0.55
SCAMP4-211ENST00000588907 ZNF233A6NK53 670 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 TISP43B9A030 160 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 GOLGA6L19H0YKK7 550 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 EOMESO95936 686 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 YARSP54577 528 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 SPAG1Q07617 926 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 SURF1Q15526 300 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 SNRNP35Q16560 246 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 UBXN11Q5T124 520 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 CEP135Q66GS9 1140 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 INTS8Q75QN2 995 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 CD302Q8IX05 232 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 AOPEPQ8N6M6 819 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 ANKRD20A12PQ8NF67 263 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 BADQ92934 168 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 ZBTB45Q96K62 511 aaPredicted RBP18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 TSPAN18Q96SJ8 248 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 OSBPL7Q9BZF2 842 aa18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 MTIF3Q9H2K0 278 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 ELAC1Q9H777 363 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 MAGEC2Q9UBF1 373 aaPredicted RBP18.48■□□□□ 0.55
SCAMP4-211ENST00000588907 FAM189A1O60320 539 aa18.47■□□□□ 0.55
SCAMP4-211ENST00000588907 HARSP12081 509 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-211ENST00000588907 RGS19P49795 217 aa18.47■□□□□ 0.55
SCAMP4-211ENST00000588907 FRMD5Q7Z6J6 570 aa18.47■□□□□ 0.55
SCAMP4-211ENST00000588907 MRPL10Q7Z7H8 261 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-211ENST00000588907 ACAP3Q96P50 834 aa18.47■□□□□ 0.55
SCAMP4-211ENST00000588907 FAM213AQ9BRX8 229 aa18.47■□□□□ 0.55
SCAMP4-211ENST00000588907 SRRTQ9BXP5 876 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-211ENST00000588907 IKZF4Q9H2S9 585 aa18.47■□□□□ 0.55
SCAMP4-211ENST00000588907 PCIF1Q9H4Z3 704 aa18.47■□□□□ 0.55
SCAMP4-211ENST00000588907 RPF1Q9H9Y2 349 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms