RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 USP37Q86T82 979 aa24.24■■□□□ 1.47
ATG4D-209ENST00000588857 SERINC5Q86VE9 423 aa24.24■■□□□ 1.47
ATG4D-209ENST00000588857 ANKLE1Q8NAG6 615 aa24.24■■□□□ 1.47
ATG4D-209ENST00000588857 OSMRQ99650 979 aa24.24■■□□□ 1.47
ATG4D-209ENST00000588857 DNAH12Q6ZR08 3092 aa24.23■■□□□ 1.47
ATG4D-209ENST00000588857 A0A1W2PQ45 241 aaPredicted RBP24.23■■□□□ 1.47
ATG4D-209ENST00000588857 A0A1W2PQY0 241 aa24.23■■□□□ 1.47
ATG4D-209ENST00000588857 M0QZ92 97 aa24.23■■□□□ 1.47
ATG4D-209ENST00000588857 HARSP12081 509 aaKnown RBP24.23■■□□□ 1.47
ATG4D-209ENST00000588857 NCBP1Q09161 790 aaKnown RBP24.23■■□□□ 1.47
ATG4D-209ENST00000588857 TBX2Q13207 712 aaPredicted RBP24.23■■□□□ 1.47
ATG4D-209ENST00000588857 TRIM14Q14142 442 aa24.23■■□□□ 1.47
ATG4D-209ENST00000588857 PCBP1Q15365 356 aaKnown RBP eCLIP24.23■■□□□ 1.47
ATG4D-209ENST00000588857 AMHR2Q16671 573 aa24.23■■□□□ 1.47
ATG4D-209ENST00000588857 MPZL3Q6UWV2 235 aa24.23■■□□□ 1.47
ATG4D-209ENST00000588857 HAPLN2Q9GZV7 340 aa24.23■■□□□ 1.47
ATG4D-209ENST00000588857 PHF24Q9UPV7 400 aa24.23■■□□□ 1.47
ATG4D-209ENST00000588857 NOD1Q9Y239 953 aa24.23■■□□□ 1.47
ATG4D-209ENST00000588857 TNFSF13BQ9Y275 285 aa24.23■■□□□ 1.47
ATG4D-209ENST00000588857 TULP1O00294 542 aaPredicted RBP24.22■■□□□ 1.47
ATG4D-209ENST00000588857 ADRB2P07550 413 aa24.22■■□□□ 1.47
ATG4D-209ENST00000588857 DARSP14868 501 aaKnown RBP24.22■■□□□ 1.47
ATG4D-209ENST00000588857 CRYBB1P53674 252 aaPredicted RBP24.22■■□□□ 1.47
ATG4D-209ENST00000588857 MCL1Q07820 350 aa24.22■■□□□ 1.47
ATG4D-209ENST00000588857 NOLC1Q14978 699 aaKnown RBP eCLIP24.22■■□□□ 1.47
ATG4D-209ENST00000588857 MFSD14AQ96MC6 490 aa24.22■■□□□ 1.47
ATG4D-209ENST00000588857 CDHR5Q9HBB8 845 aa24.22■■□□□ 1.47
ATG4D-209ENST00000588857 STARD7Q9NQZ5 370 aa24.22■■□□□ 1.47
ATG4D-209ENST00000588857 DNM1LO00429 736 aa24.21■■□□□ 1.47
ATG4D-209ENST00000588857 TRIM49P0CI25 452 aa24.21■■□□□ 1.47
ATG4D-209ENST00000588857 TRIM49CP0CI26 452 aa24.21■■□□□ 1.47
ATG4D-209ENST00000588857 PROZP22891 400 aa24.21■■□□□ 1.47
ATG4D-209ENST00000588857 EIF4BP23588 611 aaKnown RBP24.21■■□□□ 1.47
ATG4D-209ENST00000588857 ACOT2P49753 483 aa24.21■■□□□ 1.47
ATG4D-209ENST00000588857 MRPS6P82932 125 aaKnown RBP24.21■■□□□ 1.47
ATG4D-209ENST00000588857 CYP24A1Q07973 514 aa24.21■■□□□ 1.47
ATG4D-209ENST00000588857 ZNF568Q3ZCX4 644 aa24.21■■□□□ 1.47
ATG4D-209ENST00000588857 CCDC155Q8N6L0 562 aa24.21■■□□□ 1.47
ATG4D-209ENST00000588857 CCDC150Q8NCX0 1101 aa24.21■■□□□ 1.47
ATG4D-209ENST00000588857 NUP58Q9BVL2 599 aa24.21■■□□□ 1.47
ATG4D-209ENST00000588857 PTPRHQ9HD43 1115 aa24.21■■□□□ 1.47
ATG4D-209ENST00000588857 STX10O60499 249 aa24.2■■□□□ 1.47
ATG4D-209ENST00000588857 TSPAN1O60635 241 aa24.2■■□□□ 1.47
ATG4D-209ENST00000588857 SFPQP23246 707 aaKnown RBP eCLIP24.2■■□□□ 1.47
ATG4D-209ENST00000588857 CATSPER4Q7RTX7 472 aa24.2■■□□□ 1.47
ATG4D-209ENST00000588857 TMC2Q8TDI7 906 aa24.2■■□□□ 1.47
ATG4D-209ENST00000588857 CCDC127Q96BQ5 260 aa24.2■■□□□ 1.47
ATG4D-209ENST00000588857 CELF4Q9BZC1 486 aaKnown RBP24.2■■□□□ 1.47
ATG4D-209ENST00000588857 PDE4DIPQ5VU43 2346 aa24.2■■□□□ 1.46
ATG4D-209ENST00000588857 A0A0U1RQG5 324 aaPredicted RBP24.2■■□□□ 1.46
ATG4D-209ENST00000588857 OGTO15294 1046 aa24.2■■□□□ 1.46
ATG4D-209ENST00000588857 ARF4P18085 180 aaPredicted RBP24.2■■□□□ 1.46
ATG4D-209ENST00000588857 TRIM21P19474 475 aaKnown RBP24.2■■□□□ 1.46
ATG4D-209ENST00000588857 ENPEPQ07075 957 aa24.2■■□□□ 1.46
ATG4D-209ENST00000588857 RBL2Q08999 1139 aa24.2■■□□□ 1.46
ATG4D-209ENST00000588857 SNX17Q15036 470 aa24.2■■□□□ 1.46
ATG4D-209ENST00000588857 CPLX3Q8WVH0 158 aa24.2■■□□□ 1.46
ATG4D-209ENST00000588857 CPB2Q96IY4 423 aa24.2■■□□□ 1.46
ATG4D-209ENST00000588857 PAWRQ96IZ0 340 aaKnown RBP24.2■■□□□ 1.46
ATG4D-209ENST00000588857 MMRN2Q9H8L6 949 aa24.2■■□□□ 1.46
ATG4D-209ENST00000588857 SIK3Q9Y2K2 1263 aa24.2■■□□□ 1.46
ATG4D-209ENST00000588857 ABLIM1O14639 778 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 FGFR4P22455 802 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 FMO5P49326 533 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 KLK7P49862 253 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 MNX1P50219 401 aaPredicted RBP24.19■■□□□ 1.46
ATG4D-209ENST00000588857 DLG4P78352 724 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 PTK7Q13308 1070 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 EEF1DP3Q658K8 133 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 NECAB2Q7Z6G3 386 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 RPAINQ86UA6 219 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 PARD3BQ8TEW8 1205 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 IQCDQ96DY2 449 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 CRACR2AQ9BSW2 395 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 PDZD7Q9H5P4 517 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 TRMT13Q9NUP7 481 aaKnown RBP24.19■■□□□ 1.46
ATG4D-209ENST00000588857 RBAKQ9NYW8 714 aaPredicted RBP24.19■■□□□ 1.46
ATG4D-209ENST00000588857 TRPV2Q9Y5S1 764 aa24.19■■□□□ 1.46
ATG4D-209ENST00000588857 GTPBP10A4D1E9 387 aaKnown RBP24.18■■□□□ 1.46
ATG4D-209ENST00000588857 AKR1B15C9JRZ8 316 aaPredicted RBP24.18■■□□□ 1.46
ATG4D-209ENST00000588857 N4BP1O75113 896 aaKnown RBP24.18■■□□□ 1.46
ATG4D-209ENST00000588857 GYPCP04921 128 aa24.18■■□□□ 1.46
ATG4D-209ENST00000588857 MCF2P10911 925 aa24.18■■□□□ 1.46
ATG4D-209ENST00000588857 MCCD1P59942 119 aaPredicted RBP24.18■■□□□ 1.46
ATG4D-209ENST00000588857 CRELD2Q6UXH1 353 aaPredicted RBP24.18■■□□□ 1.46
ATG4D-209ENST00000588857 GBP6Q6ZN66 633 aa24.18■■□□□ 1.46
ATG4D-209ENST00000588857 APBB1IPQ7Z5R6 666 aaPredicted RBP24.18■■□□□ 1.46
ATG4D-209ENST00000588857 CDR2LQ86X02 465 aaPredicted RBP24.18■■□□□ 1.46
ATG4D-209ENST00000588857 HTATIP2Q9BUP3 242 aa24.18■■□□□ 1.46
ATG4D-209ENST00000588857 SEZ6LQ9BYH1 1024 aa24.18■■□□□ 1.46
ATG4D-209ENST00000588857 CDY2AQ9Y6F7 541 aa24.18■■□□□ 1.46
ATG4D-209ENST00000588857 A0A1B0GUA9 196 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 CASP14P31944 242 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 THPOP40225 353 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 MYL7Q01449 175 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 CETN1Q12798 172 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 ARID5BQ14865 1188 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 PSMD6Q15008 389 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 EXOC3L4Q17RC7 722 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 ZBTB41Q5SVQ8 909 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms