RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 FAM186BQ8IYM0 893 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 SMCR8Q8TEV9 937 aaPredicted RBP10.4□□□□□ -0.74
LINC01539-201ENST00000587904 COG1Q8WTW3 980 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 KIFAP3Q92845 792 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 CLMNQ96JQ2 1002 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 CCDC42Q96M95 316 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 SCLT1Q96NL6 688 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 ACCSQ96QU6 501 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 LSM14BQ9BX40 385 aaKnown RBP10.4□□□□□ -0.74
LINC01539-201ENST00000587904 TRIM4Q9C037 500 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 YIPF3Q9GZM5 350 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 HAUS4Q9H6D7 363 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 NHEJ1Q9H9Q4 299 aaPredicted RBP10.4□□□□□ -0.74
LINC01539-201ENST00000587904 LZTFL1Q9NQ48 299 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 FBXL5Q9UKA1 691 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 G3BP2Q9UN86 482 aaKnown RBP10.4□□□□□ -0.74
LINC01539-201ENST00000587904 FRMD4BQ9Y2L6 1034 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 C15orf41Q9Y2V0 281 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 IGSF9BQ9UPX0 1349 aa10.4□□□□□ -0.74
LINC01539-201ENST00000587904 SSU72P8A0A1W2PR75 194 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 ABLIM1O14639 778 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 NCKAP1LP55160 1127 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 ACTR2P61160 394 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 GTF2BQ00403 316 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 E2F5Q15329 346 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 ZC2HC1CQ53FD0 456 aaPredicted RBP10.4□□□□□ -0.75
LINC01539-201ENST00000587904 LDLRAD1Q5T700 205 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 DLK2Q6UY11 383 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 SYCP3Q8IZU3 236 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 MCPH1Q8NEM0 835 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 P3H4Q92791 437 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 SLC35C1Q96A29 364 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 OPTNQ96CV9 577 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 GABBR1Q9UBS5 961 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 PNMA3Q9UL41 463 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 EXOC7Q9UPT5 735 aa10.4□□□□□ -0.75
LINC01539-201ENST00000587904 WDR81Q562E7 1941 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 CTAGE15A4D2H0 777 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 LRRC53A6NM62 1247 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 H0YCG3 227 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 EPHB6O15197 1021 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 MAPK13O15264 365 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 KRT86O43790 486 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 DGAT1O75907 488 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 LCA5LO95447 670 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 SUPT20HL2P0C7V6 817 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 CTAGE8P0CG41 777 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 KCNA1Q09470 495 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 USP4Q13107 963 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 XRCC4Q13426 336 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 SNAPC2Q13487 334 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 SPA17Q15506 151 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 ABHD15Q6UXT9 468 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 RRAGAQ7L523 313 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 CTAGE6Q86UF2 777 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 CTAGE4Q8IX94 777 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 FAM133AQ8N9E0 248 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 NSMCE1Q8WV22 266 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 SPIRE2Q8WWL2 714 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 RMDN2Q96LZ7 410 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 ANKRD27Q96NW4 1050 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 YIPF2Q9BWQ6 316 aa10.39□□□□□ -0.75
LINC01539-201ENST00000587904 DNAAF2Q9NVR5 837 aaKnown RBP10.39□□□□□ -0.75
LINC01539-201ENST00000587904 REXO2Q9Y3B8 237 aaKnown RBP10.39□□□□□ -0.75
LINC01539-201ENST00000587904 CNMDO75829 334 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 NOL4O94818 638 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 ATG7O95352 703 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 LINGO3P0C6S8 592 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 TGFB3P10600 412 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 GNAT1P11488 350 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 PRKCEQ02156 737 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 DMP1Q13316 513 aaPredicted RBP10.38□□□□□ -0.75
LINC01539-201ENST00000587904 MOGSQ13724 837 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 GPR162Q16538 588 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 EXOC3L4Q17RC7 722 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 SLC9C1Q4G0N8 1177 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 XKR3Q5GH77 459 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 DCAF17Q5H9S7 520 aaPredicted RBP10.38□□□□□ -0.75
LINC01539-201ENST00000587904 SFMBT2Q5VUG0 894 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 C6orf89Q6UWU4 347 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 ANO5Q75V66 913 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 EXOC8Q8IYI6 725 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 TEX9Q8N6V9 391 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 SHCBP1Q8NEM2 672 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 GANQ9H2C0 597 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 MROH8Q9H579 483 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 BCAS3Q9H6U6 928 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 CLIC2O15247 247 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 CREB3O43889 395 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 BUB1BO60566 1050 aaPredicted RBP10.38□□□□□ -0.75
LINC01539-201ENST00000587904 STBD1O95210 358 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 SERPING1P05155 500 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 ANXA13P27216 316 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 CASP4P49662 377 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 VAV2P52735 878 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 FKBP1BP68106 108 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 CNTN2Q02246 1040 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 RIPK1Q13546 671 aa10.38□□□□□ -0.75
LINC01539-201ENST00000587904 EAPPQ56P03 285 aaPredicted RBP10.38□□□□□ -0.75
LINC01539-201ENST00000587904 RNF187Q5TA31 235 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms