RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 F2P00734 622 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 RFX1P22670 979 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 MAP2K1Q02750 393 aaPredicted RBP21.53■■□□□ 1.04
TRIM47-204ENST00000587339 POU5F1BQ06416 359 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 ASTE1Q2TB18 679 aaPredicted RBP21.53■■□□□ 1.04
TRIM47-204ENST00000587339 CAPNS2Q96L46 248 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 ACO2Q99798 780 aaKnown RBP21.53■■□□□ 1.04
TRIM47-204ENST00000587339 STK33Q9BYT3 514 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 AP5M1Q9H0R1 490 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 FZD8Q9H461 694 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 HAUS4Q9H6D7 363 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 ACKR2O00590 384 aa21.52■■□□□ 1.04
TRIM47-204ENST00000587339 LCA5LO95447 670 aa21.52■■□□□ 1.04
TRIM47-204ENST00000587339 ARHGAP25P42331 645 aa21.52■■□□□ 1.04
TRIM47-204ENST00000587339 PHKA2P46019 1235 aa21.52■■□□□ 1.04
TRIM47-204ENST00000587339 CHMP4BP1P59074 171 aa21.52■■□□□ 1.04
TRIM47-204ENST00000587339 PSMD6Q15008 389 aa21.52■■□□□ 1.04
TRIM47-204ENST00000587339 ENOX2Q16206 610 aaKnown RBP21.52■■□□□ 1.04
TRIM47-204ENST00000587339 MARCH8Q5T0T0 291 aa21.52■■□□□ 1.04
TRIM47-204ENST00000587339 PHLDB3Q6NSJ2 640 aa21.52■■□□□ 1.04
TRIM47-204ENST00000587339 CRELD2Q6UXH1 353 aaPredicted RBP21.52■■□□□ 1.04
TRIM47-204ENST00000587339 IRF2BP2Q7Z5L9 587 aa21.52■■□□□ 1.04
TRIM47-204ENST00000587339 FNBP1Q96RU3 617 aa21.52■■□□□ 1.04
TRIM47-204ENST00000587339 IRX2Q9BZI1 471 aaPredicted RBP21.52■■□□□ 1.04
TRIM47-204ENST00000587339 RBAKQ9NYW8 714 aaPredicted RBP21.52■■□□□ 1.04
TRIM47-204ENST00000587339 BZW2Q9Y6E2 419 aaKnown RBP21.52■■□□□ 1.04
TRIM47-204ENST00000587339 PCNTO95613 3336 aa21.52■■□□□ 1.04
TRIM47-204ENST00000587339 RRN3P2A6NIE6 340 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 ZNF263O14978 683 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 HARSP12081 509 aaKnown RBP21.51■■□□□ 1.03
TRIM47-204ENST00000587339 AKR1A1P14550 325 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 STAT1P42224 750 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 TERF1P54274 439 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 KIAA0753Q2KHM9 967 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 REM2Q8IYK8 340 aaPredicted RBP21.51■■□□□ 1.03
TRIM47-204ENST00000587339 MAP7D2Q96T17 732 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 IFT122Q9HBG6 1241 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 TOPORSQ9NS56 1045 aaPredicted RBP21.51■■□□□ 1.03
TRIM47-204ENST00000587339 SETD4Q9NVD3 440 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 F8VZ95 297 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 ABL1P00519 1130 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 VTNP04004 478 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 IRX5P78411 483 aaPredicted RBP21.51■■□□□ 1.03
TRIM47-204ENST00000587339 MBTD1Q05BQ5 628 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 PRPF4BQ13523 1007 aaKnown RBP21.51■■□□□ 1.03
TRIM47-204ENST00000587339 DRAP1Q14919 205 aaPredicted RBP21.51■■□□□ 1.03
TRIM47-204ENST00000587339 ZNF662Q6ZS27 426 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 SV2AQ7L0J3 742 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 IFIH1Q9BYX4 1025 aaKnown RBP21.51■■□□□ 1.03
TRIM47-204ENST00000587339 GABRQQ9UN88 632 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 COQ4Q9Y3A0 265 aa21.51■■□□□ 1.03
TRIM47-204ENST00000587339 MGAMO43451 1857 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 A0A087WZ62 844 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 KRT86O43790 486 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 FLT3LGP49771 235 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 VAV2P52735 878 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 CLDN10P78369 228 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 GFPT1Q06210 699 aaPredicted RBP21.5■■□□□ 1.03
TRIM47-204ENST00000587339 ZBTB41Q5SVQ8 909 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 CCDC122Q5T0U0 273 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 ZBTB33Q86T24 672 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 FMNL3Q8IVF7 1028 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 FBXL13Q8NEE6 735 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 KAT2BQ92831 832 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 JAKMIP2Q96AA8 810 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 WDR24Q96S15 920 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 FDXACB1Q9BRP7 624 aaPredicted RBP21.5■■□□□ 1.03
TRIM47-204ENST00000587339 MINDY3Q9H8M7 445 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 UBE2TQ9NPD8 197 aaPredicted RBP21.5■■□□□ 1.03
TRIM47-204ENST00000587339 CREBZFQ9NS37 354 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 NRCAMQ92823 1304 aa21.5■■□□□ 1.03
TRIM47-204ENST00000587339 EVPLQ92817 2033 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 LRRN2O75325 713 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 FERP16591 822 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 TNNI1P19237 187 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 SOX5P35711 763 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 PRKCIP41743 596 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 PTK2Q05397 1052 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 MCL1Q07820 350 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 TMEM132AQ24JP5 1023 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 ATF7IP2Q5U623 682 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 MFSD14CQ5VZR4 134 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 TSHZ1Q6ZSZ6 1077 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 LMBR1Q8WVP7 490 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 TRIB2Q92519 343 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 PPP1R16BQ96T49 567 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 PDE11AQ9HCR9 933 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 PRMT7Q9NVM4 692 aaPredicted RBP21.49■■□□□ 1.03
TRIM47-204ENST00000587339 GUCA1BQ9UMX6 200 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 PCDHA13Q9Y5I0 950 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 RIOK3O14730 519 aaKnown RBP21.49■■□□□ 1.03
TRIM47-204ENST00000587339 FANCGO15287 622 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 TBC1D8O95759 1140 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 PNMA6AP0CW24 399 aaPredicted RBP21.49■■□□□ 1.03
TRIM47-204ENST00000587339 SMIM10L2AP0DMW4 78 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 SMIM10L2BP0DMW5 78 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 CASQ1P31415 396 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 KIF5AQ12840 1032 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 ARHGAP44Q17R89 818 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 NFRKBQ6P4R8 1299 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms