RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 STPG3Q8N7X2 389 aa5.79□□□□□ -1.48
ZNF540-204ENST00000586792 TSPYL6Q8N831 410 aa5.79□□□□□ -1.48
ZNF540-204ENST00000586792 CCDC191Q8NCU4 936 aa5.79□□□□□ -1.48
ZNF540-204ENST00000586792 CCDC140Q96MF4 163 aa5.79□□□□□ -1.48
ZNF540-204ENST00000586792 NAP1L5Q96NT1 182 aaPredicted RBP5.79□□□□□ -1.48
ZNF540-204ENST00000586792 CWC25Q9NXE8 425 aaPredicted RBP5.79□□□□□ -1.48
ZNF540-204ENST00000586792 FBXL7Q9UJT9 491 aa5.79□□□□□ -1.48
ZNF540-204ENST00000586792 MAP3K2Q9Y2U5 619 aa5.79□□□□□ -1.48
ZNF540-204ENST00000586792 REXO2Q9Y3B8 237 aaKnown RBP5.79□□□□□ -1.48
ZNF540-204ENST00000586792 FER1L6Q2WGJ9 1857 aa5.79□□□□□ -1.48
ZNF540-204ENST00000586792 SLX4Q8IY92 1834 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 KLRG2A4D1S0 409 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-204ENST00000586792 PI4KAP2A4QPH2 592 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 TMEM191CA6NGB0 347 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 SCG5P05408 212 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 ERCC5P28715 1186 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-204ENST00000586792 ZNF76P36508 570 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 HHEXQ03014 270 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 CYP4F3Q08477 520 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 CRY2Q49AN0 593 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 KSR2Q6VAB6 950 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 ZNF627Q7L945 461 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 DDX60Q8IY21 1712 aaKnown RBP5.78□□□□□ -1.48
ZNF540-204ENST00000586792 ZNF808Q8N4W9 903 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-204ENST00000586792 PI4KAP1Q8N8J0 262 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 ZBTB38Q8NAP3 1195 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-204ENST00000586792 SUPT20HQ8NEM7 779 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 JDP2Q8WYK2 163 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 CLIP3Q96DZ5 547 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 PKNOX2Q96KN3 472 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 ISCA1Q9BUE6 129 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 C12orf65Q9H3J6 166 aaKnown RBP5.78□□□□□ -1.48
ZNF540-204ENST00000586792 SLC6A20Q9NP91 592 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 PARPBPQ9NWS1 579 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 PTPN22Q9Y2R2 807 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 NUB1Q9Y5A7 615 aa5.78□□□□□ -1.48
ZNF540-204ENST00000586792 ABCC4O15439 1325 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 SBF1O95248 1867 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 CCDC88AQ3V6T2 1871 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 CACNA1FO60840 1977 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 ARNTLO00327 626 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 BBOX1O75936 387 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 PEX11BO96011 259 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 SNRPB2P08579 225 aaKnown RBP5.77□□□□□ -1.49
ZNF540-204ENST00000586792 BMP5P22003 454 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 IARSP41252 1262 aaKnown RBP5.77□□□□□ -1.49
ZNF540-204ENST00000586792 ECI1P42126 302 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 C1QTNF8P60827 252 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 RNF151Q2KHN1 245 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 CCDC152Q4G0S7 254 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 SLC10A5Q5PT55 438 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 SPTY2D1Q68D10 685 aaPredicted RBP5.77□□□□□ -1.49
ZNF540-204ENST00000586792 DPP8Q6V1X1 898 aaPredicted RBP5.77□□□□□ -1.49
ZNF540-204ENST00000586792 SCYL1Q96KG9 808 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 DPYSL5Q9BPU6 564 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 TTPALQ9BTX7 342 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 GINM1Q9NU53 330 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.77□□□□□ -1.49
ZNF540-204ENST00000586792 NR2E1Q9Y466 385 aa5.77□□□□□ -1.49
ZNF540-204ENST00000586792 GOLGB1Q14789 3259 aaKnown RBP5.77□□□□□ -1.49
ZNF540-204ENST00000586792 DICER1Q9UPY3 1922 aaKnown RBP5.77□□□□□ -1.49
ZNF540-204ENST00000586792 GLTPD2A6NH11 291 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 PPIP5K2O43314 1243 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 PDE8AO60658 829 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 TOMM70O94826 608 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 PCCAP05165 728 aaPredicted RBP5.76□□□□□ -1.49
ZNF540-204ENST00000586792 FAHP16930 419 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 IL12RB1P42701 662 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 SOX9P48436 509 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 CASP7P55210 303 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 GRIN1Q05586 938 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 GRAPQ13588 217 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 SLC4A10Q6U841 1118 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 PPIL6Q8IXY8 311 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 NIM1KQ8IY84 436 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 SYNE4Q8N205 404 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 GRAPLQ8TC17 118 aaPredicted RBP5.76□□□□□ -1.49
ZNF540-204ENST00000586792 CLEC4DQ8WXI8 215 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 DNAAF4Q8WXU2 420 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 PLA2G12BQ9BX93 195 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 UBA5Q9GZZ9 404 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 TLR9Q9NR96 1032 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 ZNF277Q9NRM2 450 aaPredicted RBP5.76□□□□□ -1.49
ZNF540-204ENST00000586792 ATP6V0A2Q9Y487 856 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 MYH3P11055 1940 aa5.76□□□□□ -1.49
ZNF540-204ENST00000586792 CDHR2Q9BYE9 1310 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 LRRC37AA6NMS7 1700 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 IQCA1LA6NCM1 817 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 FOXN1O15353 648 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 VEGFAP15692 232 aaPredicted RBP5.75□□□□□ -1.49
ZNF540-204ENST00000586792 PFKPQ01813 784 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 NCAPHQ15003 741 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 SF3B3Q15393 1217 aaKnown RBP5.75□□□□□ -1.49
ZNF540-204ENST00000586792 PAN2Q504Q3 1202 aaKnown RBP5.75□□□□□ -1.49
ZNF540-204ENST00000586792 OLFM4Q6UX06 510 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 G2E3Q7L622 706 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 UBE3BQ7Z3V4 1068 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 GPATCH11Q8N954 259 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 KREMEN2Q8NCW0 462 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 LINS1Q8NG48 757 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms